UFO08067.5prime Sequence
1142 bp (1027 high quality bases) assembled on 2011-07-17
> UFO08067.5prime
CAGTCGACATGTACCTCTTTGGCGTTTTCCTGCTCTTGGTCGGCACTCAC
GTCTGCTTCATCGATGCGAACTTCGGCAGCGGAGAAGGAAATGACTACAC
CTACGGCACCCAGGCAACAACGGATACCCTCATCGCCAGTGAGACCATAA
CCAAGTCGAAATCCTTGCTGGGAATCACCACGAAGACGTATACTCTAACC
CAGGCAGGAACTGCAAAGACCATCACCTACATCAAGATCACGGATCTTAA
GAAAATGCGTGGAGCCACTGCCGAAATTACCTCCGGTGGAGTGGGATCCA
CGACAGTCACGATCAAATTCACCTCTGCACGGGGAGCTGGTATCAAGTCC
CAAGTGGTGATATACGGATCAACCGCAAGCTTTCTAGACCATTCGTTTGG
CGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATA
ATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCA
CCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATG
GAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCG
ATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTC
ATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCT
GAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCC
ATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATC
AAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCT
CAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACA
TCTTGCGAATATATGTGTAGAACTGCCGGAAATCGTCGTGTATTCACTCC
AGAGCGATGAAAACGTTTCAGTTTGCTCATGAAAACGGTGTACAGGTGAC
CACTATTCCCATTATCACCAGCTCACGTTCTTTCATTGCATACGAATTCG
GATGACATTCATCAGCCGGCAGAATGTGAATAAGGCGATAACTTGTGCTT
ATTTTCCTTTACGGTCCTAAGGTCGTAATATATCAGCGTAAC
UFO08067.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:39:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30413-RA | 526 | CG30413-RA | 44..409 | 9..374 | 1830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:39:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23329660..23330025 | 374..9 | 1830 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:39:32 has no hits.
UFO08067.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:17 Download gff for
UFO08067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30413-RA | 46..415 | 9..379 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:24:56 Download gff for
UFO08067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30413-RA | 44..413 | 9..379 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:09:07 Download gff for
UFO08067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30413-RA | 44..413 | 9..379 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:09:07 Download gff for
UFO08067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23329660..23330025 | 9..374 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:24:56 Download gff for
UFO08067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19217183..19217548 | 9..374 | 100 | | Minus |
