UFO08072.5prime Sequence
1118 bp (1018 high quality bases) assembled on 2011-07-17
> UFO08072.5prime
CAGTCGACATGCGCGGACAACTGAAAGAGTACGTTGGAGTGGCAGTGGTG
CTGATCCTGCTGGCGGGGATCAGATGGAGCGAGGCGTTTCCCATGGACCT
CTACGACGACGTGAGCGACTTCTTTGACGCCATCTCGCTGGACGATGTGG
CCAATACCGGGCGCAACACCCATCCGGAGCAGTTCTGCCTCATGCCGGCA
CGCAAGGGCGTCTGCCGCGCCCTGATCCCCCGTTGGCGCTACGATCCGGA
GCAGAAGAAGTGCGTGGAGTTCAAGTTCGGCGGCTGTGACGGCAACGAGA
ACAACTTCGCCAGCTACAAGGACTGCATGTCCACCTGCGAGGGCATGGCA
AGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAA
TCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGT
CATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCG
AGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTAT
CAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCAC
TCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCC
ATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGT
CGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTG
TCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATT
GGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCA
GGTTTTCACCGTACACGCCACATCTTGCGAATATATGTGTAGAAACTGCC
GGAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTC
ATGGAAAACGGTGTAACAACGGTGACACTATCCATATCACCAGCTCCACC
GTCTTTCATGCATACGAAATTCCGATGACATTCATCAGCGCAGGATGGAA
TAATGCGAATAAACTTGGCTTATTTTTTCTTTACGTCTTAAAAGGCGTAT
ATCCAGCTGTAACGGTCT
UFO08072.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:39:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13748-RA | 722 | CG13748-RA | 55..393 | 9..347 | 1695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:39:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8940469..8940807 | 9..347 | 1695 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:39:21 has no hits.
UFO08072.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:14 Download gff for
UFO08072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13748-RA | 49..393 | 1..347 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:24:49 Download gff for
UFO08072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13748-RA | 49..393 | 1..347 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:09:02 Download gff for
UFO08072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13748-RA | 49..393 | 1..347 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:09:02 Download gff for
UFO08072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8940463..8940807 | 1..347 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:24:49 Download gff for
UFO08072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4827968..4828312 | 1..347 | 98 | == | Plus |
