UFO08073.5prime Sequence
1098 bp (1004 high quality bases) assembled on 2011-07-17
> UFO08073.5prime
CAGTCGACATGACAACATCTGCTGTTGAAGCTCCCAATAGTGCATATCCC
GATTTAGAAAAGCGACTGGAAAGGTATTTGCGAAGTGTGTTTTGCCTAAA
GGAAATCGATACTAAAAATGAGTACATTCCAACCGAAGTGGAGTACTTTG
GAGTTCTGAGTTTAAGCGATGTTCGAGCGCCTCGCCGAAAACTGTGGTAC
ATGTACTATGCGACAACAGATCAGGTGGACAAAACTGTGGATCAGATCCA
TCGTAAATATGGCCAAAAGAATATGTACGAGCTGTTCAGAAAACCGGTAT
ATACAGGGGCTGGAATGCGATCCCGTGTTAAGAACCACTTTAAAGGGCTT
AAGTGGCACGTAAAAGGAAACATTTTGGAAGCCCCGCTAGGTAGCTCCCT
TAATGATGAGAAAGTGGTTAACACAATTGCAGATTTATATCAGAACGAAA
GGAGAAGATACTTCGATTACCTTATGTCTAGGAGTAATCTGTATAAATCG
TGTACATATCGAAACATAAATGCAGCAAGCTTTCTAGACCATTCGTTTGG
CGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATA
ATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCA
CCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATG
GAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCG
ATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTC
ATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCT
GAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCCA
TGGTGAAACGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAA
CTGGTGAAACTCACCCAGGATTGCTGAGACGAAAACATATCTCAATAAAC
CCTTTAGGAATAGCAGTTTCACGTAACACGCCAATCTGCGAATATTTGTG
TAGAACTGCGATTCGGTCATGCATTCACTTCGAGCGAAAACGTCAAGT
UFO08073.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:33:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33468-RA | 607 | CG33468-RA | 22..537 | 9..524 | 2580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:33:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14606377..14606861 | 524..40 | 2425 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:33:49 has no hits.
UFO08073.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:19 Download gff for
UFO08073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33468-RA | 1..521 | 7..528 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:02:50 Download gff for
UFO08073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33468-RA | 17..540 | 4..528 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:22 Download gff for
UFO08073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33468-RA | 17..540 | 4..528 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:22 Download gff for
UFO08073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14606377..14606861 | 40..524 | 100 | <- | Minus |
| 2R | 14606929..14606964 | 4..39 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:02:50 Download gff for
UFO08073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10493882..10494366 | 40..524 | 100 | <- | Minus |
| arm_2R | 10494434..10494469 | 4..39 | 94 | | Minus |
