UFO08075.5prime Sequence
1107 bp (1000 high quality bases) assembled on 2011-07-17
> UFO08075.5prime
CAGTCGACATGCCCGTCACCTACAGGACTCGCACACTGCCGCAACAGCGG
AAGTTGGTCCCCAACCTACTGAGGTCCATACTACGCGTCCTGGAGGAGAC
GCGCCGACCCATGAGTGACAAAGAGTTGAACTTCGTCCTGGGCGTCCAGT
ACCGACGCAACGATCCGGAGTTCTATCGCCAAGTGCAAGTCAACCTGCGC
GATGGCGTCGAATACGGCATTCTGAAACGCCAGGGAAACCAGTTTTCGCT
GCGATCCCGACGCCTTGGTGAACTGATGTCTACTCTTGGATCCTCGCCAA
ACCGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGT
GGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAG
ATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGC
GGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACT
GGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGC
CCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACA
TGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAG
CACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGA
AGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACC
CAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAA
ATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTA
GAAACTGCCGGAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTTTC
AGTTGCTCATGGAAACGGTGTACAGGTGACACTATCCCATATCACCAGCT
CACGTCTTTCATGCATACGAAATCGATGAGCATCATCAGCGGCAGATGTG
ATAGCGATAACTTGTGCTTATTTTTTCTTTACGTCTTAAAGCGTAATCAG
CTGACCGTCCTGGTTTAGGTACTGACACTGACTGAATGCCTAAGTCTTCC
ATGGCCA
UFO08075.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:33:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15577-RA | 508 | CG15577-RA | 94..391 | 8..305 | 1490 | 100 | Plus |
| CG15578-RA | 415 | CG15578-RA | 135..334 | 53..252 | 475 | 82.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:33:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4276610..4276907 | 305..8 | 1490 | 100 | Minus |
| X | 23542271 | X | 4277628..4277827 | 252..53 | 475 | 82.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:33:57 has no hits.
UFO08075.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:20 Download gff for
UFO08075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15577-RA | 94..399 | 8..314 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:03:52 Download gff for
UFO08075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15577-RA | 94..399 | 8..314 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:25 Download gff for
UFO08075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15577-RA | 94..399 | 8..314 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:46:25 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 15:03:52 has no hits.
