UFO08078.5prime Sequence
300 bp (217 high quality bases) assembled on 2011-07-17
> UFO08078.5prime
CAGTCGACATGACACCTCTACAACGCTGGCTATTTTACGCATCGCTCTTT
GCGATTCCCTATCTCTCCGTTGTTTTGGGAACAGTGCAAACGCCACTAAC
TACCAAGTATTTCCTGCACATTCAGCTTTTACCACTTTTGCTCCTCGTGA
TTTTTGGAATATATTCCGTTTGGACTGTTCTATATAGAACTCTGACTTTT
AACGATTGTCCCGAGGCCGCCAAGGAGCTGCAGGATGAAATTCAGGAGGT
TCGCAAGGATTTGATAGCCAAGGGATTTCGGTTTCGAGATGCAAGCTTTT
UFO08078.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:34:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33977-RA | 425 | CG33977-RA | 64..345 | 9..290 | 1365 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:34:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13402839..13402988 | 158..9 | 720 | 98.7 | Minus |
| 3R | 32079331 | 3R | 13402639..13402770 | 290..159 | 645 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:34:08 has no hits.
UFO08078.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:22 Download gff for
UFO08078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33977-RA | 62..343 | 9..290 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:05:23 Download gff for
UFO08078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33977-RA | 42..323 | 9..290 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:31 Download gff for
UFO08078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33977-RA | 64..345 | 9..290 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:31 Download gff for
UFO08078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13402639..13402770 | 159..290 | 99 | <- | Minus |
| 3R | 13402839..13402988 | 9..158 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:05:23 Download gff for
UFO08078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9228361..9228492 | 159..290 | 99 | <- | Minus |
| arm_3R | 9228561..9228710 | 9..158 | 98 | | Minus |
