UFO08080.5prime Sequence
1107 bp (1014 high quality bases) assembled on 2011-07-17
> UFO08080.5prime
CAGTCGACATGTCCACTGCGTCAGAATCCGCCAGGGCGGGCCTGGGCAAT
GCCGCCAGCATGGCGAATCTTGCCAAGATTGTCAATCTCATCGAATCGAA
CGTGAAGAGCGAGGATGTGGAGGTGCTTGAGGAAGCGGTCAGGGGATCAA
CCGGAACCGGAAGTGGCAGCAGCGTCCGCTTGGCCAGCAGCAGTGCCCCG
CGTAGAAGTGCCTGTGCCACATCGTATGTCCCCAAGTCACCGCAGCTGGA
GGAGATTGTGTTCGCAGAGCCCACGTATACCGAGCGATTTGCCCGATACT
TTGTGATCGTGATCTATTTGTGCGGGCTCTGCAGCCTGGGATTCTTTCTG
TCCATCTACCACATCTTCTTCTGGGATTCACGCATGCCACCCGTTTACAA
GGGCCAGAAGAAGGGGCCTGCCTTCGGCGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATT
CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA
GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAG
CTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTA
ATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGA
ACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTT
GCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTA
AATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATA
TTCTCATAAACCCTTTAGGAAATAGGCCAGGTTTTCACCGTACACGCCAC
ATCTGCGAATATATGTGTAGAACTGCCGGAAATCGTCGTGTATCCCTCCA
GAGCGATGAAACGTTCAGTTGCTCATGAAACGGTGTAACAAGGTGAAACT
ATCCCAATCACAGCTCACGTTCTTTCATGCTTCGAATCGGATGACATCCA
TCAGGCG
UFO08080.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:34:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| inaF-C-RA | 1590 | CG34321-RA | 120..539 | 9..428 | 2100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:34:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11731227..11731646 | 428..9 | 2100 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:34:16 has no hits.
UFO08080.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:24 Download gff for
UFO08080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| inaF-C-RA | 115..550 | 1..439 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:06:25 Download gff for
UFO08080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| inaF-C-RA | 115..550 | 1..439 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:35 Download gff for
UFO08080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| inaF-C-RA | 115..550 | 1..439 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:35 Download gff for
UFO08080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11731227..11731651 | 1..428 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:06:25 Download gff for
UFO08080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11625260..11625684 | 1..428 | 99 | | Minus |
