UFO08083.5prime Sequence
1076 bp (996 high quality bases) assembled on 2011-07-17
> UFO08083.5prime
CAGTCGACATGGACAACGGACCGATGGATGCCACGCCCACTGCCGCCGCC
TTCCGGCTGATTTTGCTTAGCAAATCGAATCCCGTGATGGGTTGCTACAT
GTTCTGGACCAGTCTGCTCGTGCTGAAGATGCTCGTTATGTCACTACTCA
CCGCCCGCCAGCGCATGAAAACCAAGACCTATGCCAACCCAGAGGATTTA
CGCCTGAGTCGGAGCACGGAGGTTCGATTCGGGGATCCCAATGTGGAACG
AGTTCGTCGTGCTCATCGCAACGACCTAGAGAACATTTTGCCCTTTCTTC
TGATGTCGCTGGCCTATGTGGCCAGCGGACCGAATCCCCTGACCGCCCGT
CTGCTCATCCGGATCGGTGCAAGTGCCCGGCTGATCCACACGGTGGTCTA
CGCCATCATCCCGGTTCCGCAGCCAGCAAGAGCCCTGGCCTTCTTCACCA
CCTTCGCCATCACCTGCTTCGAGGCGGGCTACGTGCTCGTCTGCTGTATC
AAGTACATTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGT
AAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTA
GGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCC
CGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCAT
TACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCC
CCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCC
GACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCA
TCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGG
GCGAGAAGTTGTCATATTGTCCACGTTTAAATCAAACTGTGAAACTCACC
AGGGATTGCTGAGACGAAAACATATCTCATAAACCCTTTAGGAATAGCAG
GTTTCACGTACACGCCACATCTGCAATATTGTGTAGACCTGCGATTCGTC
CTGAATTCATCAAGCGATGAACGGTT
UFO08083.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:33:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33177-RA | 862 | CG33177-RA | 178..683 | 4..509 | 2515 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:33:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15081544..15081799 | 4..259 | 1265 | 99.6 | Plus |
| X | 23542271 | X | 15081940..15082190 | 259..509 | 1255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:33:43 has no hits.
UFO08083.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:18 Download gff for
UFO08083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33177-RA | 1..504 | 9..510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:01:53 Download gff for
UFO08083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33177-RA | 175..683 | 1..509 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:18 Download gff for
UFO08083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33177-RA | 175..683 | 1..509 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:18 Download gff for
UFO08083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15081541..15081799 | 1..259 | 98 | -> | Plus |
| X | 15081941..15082190 | 260..509 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:01:53 Download gff for
UFO08083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14975574..14975832 | 1..259 | 98 | -> | Plus |
| arm_X | 14975974..14976223 | 260..509 | 100 | == | Plus |
