UFO08084.5prime Sequence
1106 bp (991 high quality bases) assembled on 2011-07-17
> UFO08084.5prime
CAGTCGACATGCAGTTCATCTATTTGACGCTGGCATTGGGGCTGATCTTC
ACCACTGCCCTTCAGGCGGCCATTATACCACTGACCCTGATCAAAAACGG
AATTGAAGCGAATTCCCAAGCACTTCCCACGGATACGGAGAAGTTCGGTT
ACCTGGAATTCAAACCCAATGGATCACTAATACTCAGAAGGGCGCCCAAT
CAGAGTGGCAGTAACCTACAGGACCTGGTAATGCTGAGAGGAGTTCTTCA
GGCTCTGAAAGCGAGTCCCTCGAAAATGTCGGACATCGGTGGCGAAACGC
GATTGAGCCTAAGGATTTATGGAGATGGAGTGGAACACAAGTTTCCGCCC
ATACTGGAGAATATCATTCAACGCATTCAAACGTATTTTTCGGTTTATCG
CTTTACGGATACAAGCAAACCCGGTGGATTGCAGCGAATTGAACTTACTA
CACAGCCGCCGGATGATTCTCCGGATGTAACCACTGCAAAAGCCGAGAAC
GATGATGAACTGATAGCAGTCGGTGAGCAGGACGCGTACATTACAGTGGG
GGATGATACAGACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCC
AGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAG
CCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAA
CGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGG
TCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTA
CGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTATTTCATTAAGCATTC
TGCCGACATGGAAACCCATCACAAACGGCATGATGAACCTGAATCGCCAG
CGGCATCATCAACTTGTCGCTTTGCGTATAAAATTTGCCCATGATGAAAA
CGGGGGCCAAGAAGTGTCATATGGCCACCGTTTAAATCAAAACTGGTGAA
ACTCCACCCTAGGGATTGCTGAAGACGAGAACATATTCCTCATTAAACCC
TTAGGGAAAAGTAGGTTCACCGTAACACGCCCCAACCTTTGCGAATATAG
TTGTTA
UFO08084.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:33:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13028-RA | 743 | CG13028-RA | 76..634 | 5..563 | 2780 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:33:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16923327..16923885 | 5..563 | 2780 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:33:46 has no hits.
UFO08084.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:18 Download gff for
UFO08084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13028-RA | 72..634 | 1..563 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:02:22 Download gff for
UFO08084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13028-RA | 72..634 | 1..563 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:21 Download gff for
UFO08084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13028-RA | 72..634 | 1..563 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:21 Download gff for
UFO08084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16923323..16923885 | 1..563 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:02:22 Download gff for
UFO08084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16916423..16916985 | 1..563 | 99 | == | Plus |
