Clone UFO08086 Report

Search the DGRC for UFO08086

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:80
Well:86
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG32213-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO08086.5prime Sequence

1108 bp (998 high quality bases) assembled on 2011-07-17

> UFO08086.5prime
CAGTCGACATGTTCAAATACGCTGTCGTCGTTCTCGCTCTCGTTGCCTGC
GCTGCTGCCAAGCCTGGACTCCTGGGTGCTCCCCTTGCTTACACTGCTCC
TCTGGCTTACTCTGCTCCTGCTGCCGTGGTAGCTGCTCCCGCTCCAGTTG
TGACCGCAACCAGTAGCCAGGTTATCGCCAGGAATTACAATGGAATCGCC
TCTGCTCCTGTGATTGCTCCCGTTGCTGCTCCTCTGGCTGCTCCTGTGGT
GGCGAAGTACGCGGCTACTCCTCTGGCTGCTCCTGTGGTGGCGAAGTACG
CGGCTACTCCTCTGGCTGCACGACTGGCCTACTCCTCGCCTTTGGCTTAC
TCCGCACCACTGAGCTACGCTGCTGCTCCTGCACCATTTCTCATCGCAAG
CTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATC
ATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCA
TGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAG
CGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCA
ACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTC
ATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCAT
CACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCG
CCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTC
CATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGG
CTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGAAATAGGCCAGGT
TTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGG
AAATCGTCGTGTATTCACTCCAGAGCGATGAACGTTTCAGTTGCTCATGG
AACGTGTAACACGGTGACACTATCCATATCACCAGCTCCACGTCTTCATG
CATACGAATCGGATGACATTCATCAGCGGCAGGATGTGAATAAGCCGATA
ACTGGCCT

UFO08086.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:34:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG32213-RB 526 CG32213-RB 51..438 8..395 1940 100 Plus
825-Oak-RB 514 CG32208-RB 51..438 8..395 1910 99.5 Plus
CG32214-RC 756 CG32214-RC 54..326 8..280 1335 99.3 Plus
CG32213-RB 526 CG32213-RB 268..323 264..319 265 98.2 Plus
CG32213-RB 526 CG32213-RB 307..362 225..280 265 98.2 Plus
825-Oak-RB 514 CG32208-RB 268..323 264..319 265 98.2 Plus
825-Oak-RB 514 CG32208-RB 307..362 225..280 265 98.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:34:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19475961..19476335 21..395 1875 100 Plus
3L 28110227 3L 19471732..19472106 395..21 1845 99.5 Minus
3L 28110227 3L 19467471..19467730 21..280 1270 99.2 Plus
3L 28110227 3L 19472620..19472965 31..370 1060 87.7 Plus
3L 28110227 3L 19475153..19475447 319..31 745 84.4 Minus
3L 28110227 3L 19466728..19466952 237..31 685 88 Minus
3L 28110227 3L 19467675..19467788 264..377 510 96.5 Plus
3L 28110227 3L 19423906..19424044 80..218 485 89.9 Plus
3L 28110227 3L 19478430..19478568 80..218 485 89.9 Plus
3L 28110227 3L 19423106..19423298 239..46 320 78.9 Minus
3L 28110227 3L 19488102..19488245 80..232 280 80.4 Plus
3L 28110227 3L 19488045..19488123 41..119 275 89.9 Plus
3L 28110227 3L 19476165..19476220 264..319 265 98.2 Plus
3L 28110227 3L 19476204..19476259 225..280 265 98.2 Plus
3L 28110227 3L 19424757..19424836 133..212 265 88.8 Plus
3L 28110227 3L 19471808..19471863 280..225 265 98.2 Minus
3L 28110227 3L 19471847..19471902 319..264 265 98.2 Minus
3L 28110227 3L 19423004..19423102 370..271 255 86 Minus
3L 28110227 3L 19475123..19475209 310..224 255 86.2 Minus
3L 28110227 3L 19477672..19477760 395..307 250 85.4 Minus
3L 28110227 3L 19486827..19486933 370..263 250 84.3 Minus
3L 28110227 3L 19472858..19472914 224..280 240 94.7 Plus
3L 28110227 3L 19478373..19478428 41..96 205 91.1 Plus
3L 28110227 3L 19486877..19486968 280..189 205 81.5 Minus
3L 28110227 3L 19423849..19423904 41..96 190 89.3 Plus
Blast to na_te.dros performed 2014-11-26 23:34:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2777..2891 151..34 151 60.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2764..2999 250..22 143 57.1 Minus

UFO08086.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:28 Download gff for UFO08086.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32213-RB 48..445 1..404 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:09:26 Download gff for UFO08086.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32213-RB 27..424 1..404 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:47 Download gff for UFO08086.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32213-RB 48..445 1..404 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:47 Download gff for UFO08086.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 19471732..19472106 21..395 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:09:26 Download gff for UFO08086.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19464832..19465206 21..395 99 <- Minus