Clone UFO08087 Report

Search the DGRC for UFO08087

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:80
Well:87
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG14096-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO08087.5prime Sequence

1105 bp (986 high quality bases) assembled on 2011-07-17

> UFO08087.5prime
CAGTCGACATGTTCAAATCCGCCGTTGTTATTCTGGCTATCGTTGCCTGC
GCTGCTGCCAAGCCTGGACTTCTGGGTGCTCCCCTTGCTTACACTGCTCC
TCTGGCTTACTCTGCTCCTCTGGCTTACTCAGCTCCTGCTGCCGTGGTAG
CTGCTCCCGCTCCAGTTGTGACCGCCACCAGTAGCCAGGTTATCGCCAGG
AACTACAATGGAATCGCCGTTGCTCCTGTGATTGCTCCCGTTGCCGCTCC
TGTGGTGGCCAAGTACACTGCTGCTCCTTTTGCCTACGCTTCTCCTTTGG
CCTACTCCGCTCCTCTGGCTTACACTTCTCCATTGGCTTATAAAACTCTT
CCGGCTGCTGCTCCAGTTCTTCTGGCAAGCTTTCTAGACCATTCGTTTGG
CGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATA
ATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCA
CCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATG
GAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCG
ATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTC
ATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCT
GAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCC
ATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATC
AAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAACATATTCTC
AATAAACCCTTTAGGGAAATAGGCAGGTTTCACCGTACACGCCACATCTT
GCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTCAGAG
CGATGAGACGTTTCAGTTTGCTCATGGAACGGTGTAACAGATGACACTAT
CCATATCACAGCTCACGTTCTTTCATGCATACGAATCGGATGAGCATCAT
CAAGGCGGCAGATGTGAATAAGGCGATAAACCTGGCCTATTTTTCTACGG
TCCTT

UFO08087.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:34:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG14096-RA 458 CG14096-RA 51..416 9..374 1830 100 Plus
CG18294-RA 507 CG18294-RA 55..330 9..284 1320 98.6 Plus
CG12519-RB 600 CG12519-RB 53..321 9..277 1315 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:34:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19466609..19466962 374..21 1770 100 Minus
3L 28110227 3L 19475194..19475457 284..21 1260 98.5 Minus
3L 28110227 3L 19472610..19472866 21..277 1255 99.2 Plus
3L 28110227 3L 19478373..19478568 41..236 725 91.3 Plus
3L 28110227 3L 19423849..19424044 41..236 710 90.8 Plus
3L 28110227 3L 19467481..19467687 31..255 685 88 Plus
3L 28110227 3L 19471890..19472096 255..31 685 88 Minus
3L 28110227 3L 19475971..19476177 31..255 685 88 Plus
3L 28110227 3L 19488045..19488308 41..313 670 83.9 Plus
3L 28110227 3L 19423125..19423224 238..139 335 89 Minus
3L 28110227 3L 19424757..19424836 151..230 295 91.2 Plus
3L 28110227 3L 19424852..19424908 288..344 240 94.7 Plus
3L 28110227 3L 19464433..19464518 235..150 205 82.6 Minus
Blast to na_te.dros performed 2014-11-26 23:34:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2777..2849 169..94 147 69.7 Minus

UFO08087.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:29 Download gff for UFO08087.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14096-RA 47..420 1..379 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:09:54 Download gff for UFO08087.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14096-RA 47..420 1..379 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:49 Download gff for UFO08087.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14096-RA 47..420 1..379 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:49 Download gff for UFO08087.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 19466609..19466962 21..374 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:09:54 Download gff for UFO08087.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19459709..19460062 21..374 100 <- Minus