UFO08090.5prime Sequence
1124 bp (1010 high quality bases) assembled on 2011-07-17
> UFO08090.5prime
CAGTCGACATGGGTAAGGATTACTACAAGATTCTGGGCATCGAGAGGAAT
GCGTCCAGCGAAGACGTCAAGAAGGGATACCGCCGGATGGCTCTCCGCTA
CCATCCGGACAAGAACGACCATCCGCAGGCCGAGGAGCAGTTTAGGGAGG
TGGTGGCCGCCTTCGAAGTGCTCTTTGATAAGGAAAAGCGCGAGATATAC
GACCAGCACGGCGAGGAGGGTCTCAAATGTGATGACGAGCCTGCTGCGAC
CTTCGCCCAGCCCACGCCAGACATGCTCCCCTTCATGTGCGCCGTCGGAG
GAACCGTGCTCTTTGCGTTCGCCGCCTACAAGACATTCCAGTTCTTCAAC
CGGAAAAAAGAGGCTACCCACGGCGATGGATCCTCCTCGGACGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGA
CTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGT
TCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACA
GGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATC
GCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCAC
AAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCT
TGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCAT
ATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTG
AGACGAAAAACATATTCTCAATAACCCTTTAGGGAAATAGGCCAGGTTTT
CACCGTACACGCCACATCTTGCGATATATGTGTAGAAACTGCCGGAAATC
GTCGTGTATTCACTCCAGAGCGATGACACGTTTCAGTTTGCTCATGGAAA
CGGTGTACAGGGTGACACTATCCATATCACAGCTCCACCGTCTCATGCAT
ACGAAGTCGGATGAACATTCATCAGGCGGCAGAATGTGATAAGGCCGGAT
ACTTGGCTATTTCGACGCCTTAAA
UFO08090.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:35:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7130-RA | 701 | CG7130-RA | 123..506 | 9..392 | 1920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:34:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22075251..22075634 | 392..9 | 1920 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:35:00 has no hits.
UFO08090.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:31 Download gff for
UFO08090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7130-RA | 116..512 | 1..399 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:11:18 Download gff for
UFO08090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7130-RA | 116..512 | 1..399 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:53 Download gff for
UFO08090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7130-RA | 116..512 | 1..399 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:53 Download gff for
UFO08090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22075251..22075638 | 1..392 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:11:18 Download gff for
UFO08090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22068351..22068738 | 1..392 | 98 | | Minus |
