UFO08091.5prime Sequence
1118 bp (1017 high quality bases) assembled on 2011-07-17
> UFO08091.5prime
CAGTCGACATGGACAAGCCCCAGCTTATTGAGCACCTCCACGAGGCACTC
AACTACACGGTGTACGATACGAAATGGGTGCCCCTTTCGGCCAAGTTTGT
GATTCTGGGCTCCAAGGCCAACGGGCACGGAATCATGGACATCTACGAAC
TCAACCAGGATAAGCTGGTGAAAGTGAAGTCCGTAGAGAAGAAGGTTGCC
TTCAAATGCGGCACCTTCGGAGCAGCTTCGCTCAGGAACCGCCACATGGC
CATCGGAGATTTCGAGGGCAGGCTGCAAGTTCTGGATATGGAGCAGCCGG
ACCTTCCGGTCTACAATGTAAAGGCCCACAACGGCATCATCAACACCATC
GACGCGATTGGCGGCACACAAATCGATTGCGGTGCTCCGGAAATCGTTAC
TGGAAGTCGTGACGGCGCCGTTAAAGTCTGGGATATCCGCCAGGGGCAGG
CTCCTGTGGTGGACATGTCGCCGCCGCCGCAAATGGGCGATGGCGTTAAC
AACAGCAGTGGCCGCCGGGACTGCTGGGCCGTGGCCTTTGGAAATACCTA
CAACGCTGAGGAGCGCATCGTTGCCGCCGGCTATGATAATGGAGATCTAA
AGATATTCGATTTGCGATCCCTTTCCGTACGCTGGGAGGCCACCATGAAG
AATGGTATCTGTGGACTGGAGTTCGATCGCCGGGACATTCCCATGAACAA
GCTAGCGGTCACCACTTTGGAGGGCGGTCTCCTTGTCTTCGATATGAGAA
CCCAACATCCGACCAAGGGATTTAGTTACGTGGAGGAACGCAACGCCGGA
CGCAGCGTGGGAACAAATGGCGTGATCAGCGGACCCAAAGCCACCGTTTG
GGTAGTTCGTCATCTGCCCCAGAATCGGGATCTCTTTCTCACGGGCGGCG
GAACTGGTTCCATTCGCCTGTGCAGTACGAGTATCCCGACAGGAGGTCAT
GATGACTCTGATGGAAACAAGTTGGGAGTGCTGAGCCCTATATGCTAGTG
CAGCCACTTTGAGCTCTCAGCGTCACTGCTTTGACTGGCATCAGACACTG
GGCTAGCCGTCTTGGTGGAGCATTCGAATCAAGCGTTGCGCGATTAATTA
CACCCAACTAACTTGCCA
UFO08091.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:35:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14353-RA | 1485 | CG14353-RA | 112..1228 | 9..1111 | 5065 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:35:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17908585..17909354 | 284..1042 | 3390 | 98.4 | Plus |
| 3L | 28110227 | 3L | 17908254..17908529 | 9..284 | 1380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:35:04 has no hits.
UFO08091.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:31 Download gff for
UFO08091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14353-RA | 105..1217 | 1..1101 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:11:46 Download gff for
UFO08091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14353-RA | 105..1217 | 1..1101 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:55 Download gff for
UFO08091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14353-RA | 105..1217 | 1..1101 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:55 Download gff for
UFO08091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17908247..17908528 | 1..283 | 98 | -> | Plus |
| 3L | 17908585..17909415 | 284..1101 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:11:46 Download gff for
UFO08091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17901347..17901628 | 1..283 | 98 | -> | Plus |
| arm_3L | 17901685..17902515 | 284..1101 | 97 | | Plus |
