UFO08096.5prime Sequence
1004 bp (909 high quality bases) assembled on 2011-07-17
> UFO08096.5prime
CAGTCGACATGGATTTCAAGAAGCTGAAGAAAATGGAGGAGGTGGTGCGC
ATCGGCGGCAAAGGATCTATGCGCCGCAAGCATAAGAGATTCCCATCCTC
GGCTGCGGCCGAGAAGCGCGTGCAAGCCACATTGGCCATGTTGCCGTTGA
AAAGTATCGACGAAATCGAGGAGGTGACCATCGAGTTCACCAATTCCAGT
AAGGTTGTGTTAACCATGCCCAGGGTTCAGAGCACCGCTGGCAATTCTTT
CTTCGTGGTTAGTGGCGATTTCGTGCGCAAGTCGTCAACAGCTGGCCCAT
CGAAAGTGGCCAAGGCAGCCAATGCGCCCAAGGCACCCATGCCACCTAAG
CCACCCAAGCCGGAAGCTTTTTCCGACAAAAAGCCAGAATCAGAGGAGTC
CATTAAGGTGGCCAAGAAGCCCAAGAAGCCGCGCAATCGTGTTCGTCCTC
GCAACAAGAAGGTCCAAATGATGCTCTCCAAAAACAAAGAGGACGCAGCC
ATGGCTGGCTGGGATTCGGAGCCGAAGCTTAGCAATGGTAAACCAATTTT
GATCTCCTCTGAAGATGGCAGCGATCCGGATAATGAGAAGGTGCCATCGG
ATGAGTCTGATGTGGATCGGACCATAGTCTGCGACAAAGATTCGCTGGGA
AGCTTCGGCGATGATTCCGACGGCTAGGAGGACGTTGACACTACGGAGTC
GATCTACCTGTCCTCCTACTCCAATTACTATTATTTGACGGAGCAGCTCT
ATCCAAATACTTATCGCGTTCAAGTCTCAGAGGACGAAGATGCAAGCTTT
CTAGACTCATTCGTTTTGGCCGCGCGGGCCCAGGTAAGTGGTCATAATCA
TAATCATAATCATAATTCATAATCACAACTAGCCTAGGAGATCCCTGGTC
ATGACTAGGTGCTTTGAATTCCTCCACCAATTAAAAACGCCCCGGCGGCA
AACCGAGCGTTTCCTGAACCAAATTCCAAGATGGGAGTTCCTGAGGTCAT
TAAC
UFO08096.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:34:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
betaNACtes1-RA | 1084 | CG13402-RA | 101..883 | 9..791 | 3855 | 99.5 | Plus |
betaNACtes3-RA | 967 | CG32601-RA | 118..903 | 9..791 | 2885 | 91.2 | Plus |
betaNACtes6-RA | 967 | CG32598-RA | 118..903 | 9..791 | 2840 | 90.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:34:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 14171688..14172470 | 791..9 | 3855 | 99.5 | Minus |
X | 23542271 | X | 14378977..14379762 | 9..791 | 2860 | 91.2 | Plus |
X | 23542271 | X | 14316194..14316979 | 791..9 | 2815 | 90.8 | Minus |
X | 23542271 | X | 14380865..14381352 | 310..791 | 1620 | 89.8 | Plus |
X | 23542271 | X | 14314705..14315021 | 791..478 | 1100 | 90.5 | Minus |
X | 23542271 | X | 14380507..14380860 | 9..359 | 925 | 84.7 | Plus |
X | 23542271 | X | 14315096..14315412 | 322..9 | 800 | 84.2 | Minus |
X | 23542271 | X | 15576746..15576844 | 499..597 | 345 | 89.9 | Plus |
X | 23542271 | X | 14315018..14315117 | 424..328 | 255 | 86 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:34:34 has no hits.
UFO08096.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:26 Download gff for
UFO08096.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13402-RA | 101..888 | 9..797 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:08:30 Download gff for
UFO08096.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
betaNACtes1-RA | 101..888 | 9..797 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:43 Download gff for
UFO08096.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
betaNACtes1-RA | 101..888 | 9..797 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:43 Download gff for
UFO08096.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 14171683..14172470 | 9..797 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:08:30 Download gff for
UFO08096.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 14065716..14066503 | 9..797 | 99 | | Minus |