Clone UFO08096 Report

Search the DGRC for UFO08096

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:80
Well:96
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG13402-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO08096.5prime Sequence

1004 bp (909 high quality bases) assembled on 2011-07-17

> UFO08096.5prime
CAGTCGACATGGATTTCAAGAAGCTGAAGAAAATGGAGGAGGTGGTGCGC
ATCGGCGGCAAAGGATCTATGCGCCGCAAGCATAAGAGATTCCCATCCTC
GGCTGCGGCCGAGAAGCGCGTGCAAGCCACATTGGCCATGTTGCCGTTGA
AAAGTATCGACGAAATCGAGGAGGTGACCATCGAGTTCACCAATTCCAGT
AAGGTTGTGTTAACCATGCCCAGGGTTCAGAGCACCGCTGGCAATTCTTT
CTTCGTGGTTAGTGGCGATTTCGTGCGCAAGTCGTCAACAGCTGGCCCAT
CGAAAGTGGCCAAGGCAGCCAATGCGCCCAAGGCACCCATGCCACCTAAG
CCACCCAAGCCGGAAGCTTTTTCCGACAAAAAGCCAGAATCAGAGGAGTC
CATTAAGGTGGCCAAGAAGCCCAAGAAGCCGCGCAATCGTGTTCGTCCTC
GCAACAAGAAGGTCCAAATGATGCTCTCCAAAAACAAAGAGGACGCAGCC
ATGGCTGGCTGGGATTCGGAGCCGAAGCTTAGCAATGGTAAACCAATTTT
GATCTCCTCTGAAGATGGCAGCGATCCGGATAATGAGAAGGTGCCATCGG
ATGAGTCTGATGTGGATCGGACCATAGTCTGCGACAAAGATTCGCTGGGA
AGCTTCGGCGATGATTCCGACGGCTAGGAGGACGTTGACACTACGGAGTC
GATCTACCTGTCCTCCTACTCCAATTACTATTATTTGACGGAGCAGCTCT
ATCCAAATACTTATCGCGTTCAAGTCTCAGAGGACGAAGATGCAAGCTTT
CTAGACTCATTCGTTTTGGCCGCGCGGGCCCAGGTAAGTGGTCATAATCA
TAATCATAATCATAATTCATAATCACAACTAGCCTAGGAGATCCCTGGTC
ATGACTAGGTGCTTTGAATTCCTCCACCAATTAAAAACGCCCCGGCGGCA
AACCGAGCGTTTCCTGAACCAAATTCCAAGATGGGAGTTCCTGAGGTCAT
TAAC

UFO08096.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:34:35
Subject Length Description Subject Range Query Range Score Percent Strand
betaNACtes1-RA 1084 CG13402-RA 101..883 9..791 3855 99.5 Plus
betaNACtes3-RA 967 CG32601-RA 118..903 9..791 2885 91.2 Plus
betaNACtes6-RA 967 CG32598-RA 118..903 9..791 2840 90.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:34:33
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14171688..14172470 791..9 3855 99.5 Minus
X 23542271 X 14378977..14379762 9..791 2860 91.2 Plus
X 23542271 X 14316194..14316979 791..9 2815 90.8 Minus
X 23542271 X 14380865..14381352 310..791 1620 89.8 Plus
X 23542271 X 14314705..14315021 791..478 1100 90.5 Minus
X 23542271 X 14380507..14380860 9..359 925 84.7 Plus
X 23542271 X 14315096..14315412 322..9 800 84.2 Minus
X 23542271 X 15576746..15576844 499..597 345 89.9 Plus
X 23542271 X 14315018..14315117 424..328 255 86 Minus
Blast to na_te.dros performed on 2014-11-26 23:34:34 has no hits.

UFO08096.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:26 Download gff for UFO08096.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13402-RA 101..888 9..797 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:08:30 Download gff for UFO08096.5prime
Subject Subject Range Query Range Percent Splice Strand
betaNACtes1-RA 101..888 9..797 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:43 Download gff for UFO08096.5prime
Subject Subject Range Query Range Percent Splice Strand
betaNACtes1-RA 101..888 9..797 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:43 Download gff for UFO08096.5prime
Subject Subject Range Query Range Percent Splice Strand
X 14171683..14172470 9..797 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:08:30 Download gff for UFO08096.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14065716..14066503 9..797 99   Minus