UFO08108.5prime Sequence
695 bp (589 high quality bases) assembled on 2011-07-17
> UFO08108.5prime
CAGTCGACATGGACAAGAAGAGCGCAGCGTTGTACAAAAAGATGCAGGCC
GAGATTGAGTCGTACCAGAACCTGCAAAAATCCTGCTTGAAGATGGTGAA
GCAGCGAGCAGTGCTCGAAAGCCAGCTGAACGAGAACAAGTGCGTCCTGG
ACGAGCTGAATCTTCTGGGCCCCGACAACAAGGTCTACAAGCTCTTCGGG
CCCGTTCTGGTCAAACAGGAGCTGGAGGAGTCGCGCCAGAATGTCGGAAA
GCGCATCGAGTACATCTCCAAGGAGCTGAAGAGCTCCACCGACGCACTGG
AGAACATGGAGAAGGACATGCTGAAGCATCGGGAATCCGTGGCCAAGTAC
CAACAGCAGTGTCAGGTGGCGGCGGCCATGCAGGCAAGCTTTCTAGACCA
TTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATC
ATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTT
GGATTCTCACAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAA
TCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAG
CGAGCTCGATATCAAATTACGCCCCGCCCCTGCCATTCATCGCAATACTG
TTGTAATTCATTAATCATTTCTGCCCGACTTGAAAGCCATTCACA
UFO08108.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:35:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7770-RB | 847 | CG7770-RB | 152..526 | 9..383 | 1875 | 100 | Plus |
CG7770-RA | 650 | CG7770-RA | 152..526 | 9..383 | 1875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:35:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19923982..19924208 | 82..308 | 1135 | 100 | Plus |
3L | 28110227 | 3L | 19924292..19924367 | 308..383 | 380 | 100 | Plus |
3L | 28110227 | 3L | 19923822..19923894 | 9..81 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:35:37 has no hits.
UFO08108.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:38 Download gff for
UFO08108.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7770-RA | 130..507 | 9..387 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:16:23 Download gff for
UFO08108.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7770-RA | 152..529 | 9..387 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:10 Download gff for
UFO08108.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7770-RA | 152..529 | 9..387 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:10 Download gff for
UFO08108.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19923982..19924207 | 82..307 | 100 | -> | Plus |
3L | 19924292..19924370 | 308..387 | 97 | == | Plus |
3L | 19923822..19923894 | 9..81 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:16:23 Download gff for
UFO08108.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19917392..19917470 | 308..387 | 97 | == | Plus |
arm_3L | 19916922..19916994 | 9..81 | 100 | -> | Plus |
arm_3L | 19917082..19917307 | 82..307 | 100 | -> | Plus |