Clone UFO08108 Report

Search the DGRC for UFO08108

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:81
Well:8
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG7770-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO08108.5prime Sequence

695 bp (589 high quality bases) assembled on 2011-07-17

> UFO08108.5prime
CAGTCGACATGGACAAGAAGAGCGCAGCGTTGTACAAAAAGATGCAGGCC
GAGATTGAGTCGTACCAGAACCTGCAAAAATCCTGCTTGAAGATGGTGAA
GCAGCGAGCAGTGCTCGAAAGCCAGCTGAACGAGAACAAGTGCGTCCTGG
ACGAGCTGAATCTTCTGGGCCCCGACAACAAGGTCTACAAGCTCTTCGGG
CCCGTTCTGGTCAAACAGGAGCTGGAGGAGTCGCGCCAGAATGTCGGAAA
GCGCATCGAGTACATCTCCAAGGAGCTGAAGAGCTCCACCGACGCACTGG
AGAACATGGAGAAGGACATGCTGAAGCATCGGGAATCCGTGGCCAAGTAC
CAACAGCAGTGTCAGGTGGCGGCGGCCATGCAGGCAAGCTTTCTAGACCA
TTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATC
ATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTT
GGATTCTCACAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAA
TCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAG
CGAGCTCGATATCAAATTACGCCCCGCCCCTGCCATTCATCGCAATACTG
TTGTAATTCATTAATCATTTCTGCCCGACTTGAAAGCCATTCACA

UFO08108.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:35:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG7770-RB 847 CG7770-RB 152..526 9..383 1875 100 Plus
CG7770-RA 650 CG7770-RA 152..526 9..383 1875 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:35:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19923982..19924208 82..308 1135 100 Plus
3L 28110227 3L 19924292..19924367 308..383 380 100 Plus
3L 28110227 3L 19923822..19923894 9..81 365 100 Plus
Blast to na_te.dros performed on 2014-11-26 23:35:37 has no hits.

UFO08108.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:38 Download gff for UFO08108.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7770-RA 130..507 9..387 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:16:23 Download gff for UFO08108.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7770-RA 152..529 9..387 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:10 Download gff for UFO08108.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7770-RA 152..529 9..387 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:10 Download gff for UFO08108.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 19923982..19924207 82..307 100 -> Plus
3L 19924292..19924370 308..387 97 == Plus
3L 19923822..19923894 9..81 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:16:23 Download gff for UFO08108.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19917392..19917470 308..387 97 == Plus
arm_3L 19916922..19916994 9..81 100 -> Plus
arm_3L 19917082..19917307 82..307 100 -> Plus