UFO08123.5prime Sequence
1151 bp (1006 high quality bases) assembled on 2011-07-17
> UFO08123.5prime
CAGTCGACATGAGCTCCAGCAAGATTGCTCTTCTCAGTGTGTCGGACAAG
ACGGGCCTGCTCGACTTGGGCAAGAGTTTGGTGGCACTGGGCTTTGACCT
GGTTGCCAGTGGAGGCACTGCAACTAGCTTGCGTGGCGCTGGCCTGAAGG
TGAGGGATGTCTCGGAGATTACAGGAGCACCTGAGATGCTCGGTGGACGT
GTGAAGACGCTGCACCCGGCTGTGCATGCTGGAATCCTTTCCCGCACCAC
CGACTCTGATCTGGCTGACATGCGCAAGCAGGGCTTCGATCTTATCCAGC
TGGTGGTCTGCAATCTGTACCCCTTCGCCAGCACCGTAGCGAAGCCTGAT
GTTACGCTGGCCGATGCCGTGGAGAACATCGATATTGGAGGCGTTACTCT
GCTCCGGGCGGCTGCTAAGAATCACCAGCGAGTCACAGTTGTCTGCGAAG
CAGTGGATTATGATCGTGTCCTGTCGGAGTTGAAGGCTTCGGGGAATACC
ACCGTGGAGACGCGTCAGGCTCTGGCTCTCAAGGCATTCACGCACACCGC
CACCTACGATGATGCCATCTCAGATTACTTCAGGAAACAGTATGGATCTG
GGGTGTCCCAGCTACCGTTGCGCTATGGCATGAATCCCCACCAGAAGCCG
GCTCAGCTCTACACGCAGCTGGCCAAGCTTCCACTGACGGTCCTCAATGC
CTCGCCGGGATTTATCAACCTGTGCGACGCCCTCAACGGTTGGCAGTTGG
TTAGGGAACTGAAGAAAGCTCTGCAGCTGCCGGCGGCCACCAGCTTTAAG
CACGTTTCTCCAGCGGGTGCGGCTGTTGGAGTGCCTCTAAATCCGGCACA
GGCCAAGCTGTGCATGGTGGATGATCTGTACGAGCAGTTGACACCTCTGG
CAACGGCCTATGCTCGTGCCCGTGGTGCCGACCGCATGAGCCTCCTTCGG
CGACTTTGTGGCCCTCTCTGATGTGGTGGCGATGTTGTGACGCCAGATAA
TCTTCGCGAAGAGGGTGTTTCGATGGTATTATTGCCCGCGGTTATGAGCC
CGAAGCTTCTTGGAGAATCCTTGAAAAAAAGAAGAATGGCGGCTATACGT
TACTTGCAAATGATCCCACCTCTACAACCCCTCCGGGGGAGCGCAGACTA
T
UFO08123.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:35:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11089-RB | 2195 | CG11089-RB | 57..1136 | 8..1095 | 5015 | 98.3 | Plus |
| CG11089-RA | 2272 | CG11089-RA | 134..1213 | 8..1095 | 5015 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:35:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24879176..24880236 | 27..1095 | 4675 | 97.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:35:49 has no hits.
UFO08123.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:40 Download gff for
UFO08123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11089-RC | 1689..2784 | 1..1104 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:17:52 Download gff for
UFO08123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11089-RE | 1946..3041 | 1..1104 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:13 Download gff for
UFO08123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11089-RA | 127..1222 | 1..1104 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:13 Download gff for
UFO08123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24879177..24880245 | 28..1104 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:17:52 Download gff for
UFO08123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20704899..20705967 | 28..1104 | 97 | | Plus |
