UFO08124.5prime Sequence
1003 bp (982 high quality bases) assembled on 2011-07-17
> UFO08124.5prime
CAGTCGACATGGCTCTTTTGACTGAGAAGCGTGTTAAAAAGACACATGCT
CCTGCGAGCGACAGTTCTCCGGAGGAATCCGATTCCGAGGGCAGCCAGAA
TTCAGCCAGCGAAGCGGAGGGCAACGCCGGCTGGGCGGATTCCATTCAGA
AGGTCCTGAAGACCACCAAGCCGAAGACCCAAAAAAAAACCGTGCTAGCT
CGAGCCAAAAAAAGCCAGGCGGCTGTGCGATTCCAGAAAGACGCCGCCAA
CAAAAAGCCAGGATTCGATTTCGAGATCGAGAAAGCAGATGTCAAGGAGG
AGGACGAAGGCGATAACCATGAAGACGAGAAGCCGCAGGCCTCTGCCTTG
GATGCCACGCTAACCAAACAGCAGCGTAAGAATGTGCCCCTCCAGCTGCG
TGTGAAGCCCAGTTTCCGGGACATGGAGCGTGAACGAACGCTCCGCAAAG
TTGCCACTCGTGGAGTGGTGCAGTTCTTTAATGCCGTGCGCATTCAGCAG
AAGGATCTGCAGCAGCAGCTGGAGGAAGCGGGTCCGCTGGACAGCCGACA
GGATGCGGTGCTAAACAACATCAACAAGCGAAAGTTTTTGGACGTCCTGA
TGAGCGGGAAGCGCGCCAAATCCACACCCGTAGATAACGCTGTAAAGAAA
GAGGAACAAGAAACGGATGACGACGACGAAGACAAGGGCTCCAGCGGCAA
AAAGAAGTCCGAATGGAGTGTGCTGCGCGAGGACTTCATGACCAACAAGA
AGATCAAGCACTGGGACGAGGAAGACGACGACGAGGAGGGTCACAATGAT
GAAGCTGATGACAGCGATTACGATGATGGGGAAGAAGCAAGCTTTCTAGA
CCATTCGTTTGGCGCGCGGGCCCAGGTTAAGTGGTCATAATCATAATCAT
AATCATAATCATAATCACACTAGCTAAGAAGATCTGGTCATGACTAGTGC
TTGATTCCTCACAATAAAAAACGCCCGGGCGGCAACCGGAGCGTTCTGAA
CAA
UFO08124.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:35:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3817-RA | 879 | CG3817-RA | 15..842 | 9..836 | 4140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:35:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14898753..14899580 | 9..836 | 4140 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:35:53 has no hits.
UFO08124.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:40 Download gff for
UFO08124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3817-RA | 41..875 | 9..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:18:21 Download gff for
UFO08124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3817-RA | 41..875 | 9..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:15 Download gff for
UFO08124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3817-RA | 15..849 | 9..845 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:15 Download gff for
UFO08124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14898753..14899580 | 9..836 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:18:21 Download gff for
UFO08124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10724475..10725302 | 9..836 | 100 | == | Plus |
