UFO08125.5prime Sequence
1120 bp (1036 high quality bases) assembled on 2011-07-17
> UFO08125.5prime
CAGTCGACATGATGTTGGCCGATGAATTTGAAACGATGTGCAAGAATTAT
TTTGTAAATTCCATGACTCACGTCTGCTCGTCCCTCGTCCCGGAATCGCT
GACCAAGAAGTATCGCAATCGGCTGATCATTCCCAAGGATCCCTACAGTA
TCTTCAAGCTGAACAGCCGGAATTCCAGCTATCTCCTCGCCTTCCGCTTC
CCGGAAATGCGCAATTGCCGAAAACTCTGGATGTCGGATTTGCGCAATCT
AAATTGCGAGATTAAAGGCGGCAAAATGAAGAACTTCTTCTTCGCCAATA
GCTACCGCAAGTGCTACAACTTTGCCATGGACCTAACCTCGGAGCTAAAG
GCGCACTGCGGCGCCAAGAACAATGAGGAGGATACGCAGTCGGGCTACTA
CTACACGAACTTCGACGGGAATCCGGTCATTCAGACCAACTCAACTGCTT
GTCTTTTGCTGGGAACTTCAACTCTGGTACTCTGCCTGATCATCTCGTTT
CTAATGTTCGCCATTCTGCAATGGAAGGCATCTCGGCTGCGAGGCAGCAA
GTCAGTCCAAGGCGGTCCATGTGAATCCGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATT
CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA
GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAG
CTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTA
ATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGA
ACCTGATCGCCAGCGGCATCAGCACCTTGTCGCTTGCGTATATATTTGCC
CATGGTGAAACGGGGCGAAGAGTGTCATATGCCACGTTTAATCAAAACTG
GTGAACTCACCCAAGGGATTGGCCTGAACGAAAAACATATTCTCAATAAC
CTTTAAGGGAATAGGCAAGTTTCCACGGTACCCGCCCAATTCTTGCAATA
TGTGTAGAACTTGCCGAATC
UFO08125.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:36:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13538-RA | 989 | CG13538-RA | 87..659 | 6..578 | 2865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:36:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23087263..23087835 | 6..578 | 2865 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 23:36:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dkoe\Gandalf | 979 | Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). | 44..88 | 27..71 | 117 | 73.3 | Plus |
UFO08125.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:43 Download gff for
UFO08125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13538-RA | 2..574 | 6..578 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:20:19 Download gff for
UFO08125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13538-RA | 84..659 | 1..578 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:22 Download gff for
UFO08125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13538-RA | 84..659 | 1..578 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:22 Download gff for
UFO08125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23087260..23087834 | 1..577 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:20:19 Download gff for
UFO08125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18974783..18975357 | 1..577 | 99 | <- | Plus |
