UFO08130.5prime Sequence
1144 bp (1029 high quality bases) assembled on 2011-07-17
> UFO08130.5prime
CAGTCGACATGGCCAGCCTGACGGAAGATCGGGGTCCCAATATCTGCAAC
TGTAGTCGAATGCGATCCGAGTGCTGGACAAGACATTCGATCACCGCCGA
GGACACGATGACTCGTCTGGCTTTAAAGTACGACACGAGCATTGGGCGCA
TATGCAGGGCCAATCGAATGCACAGCCAGGATGTCCTGCAGGCACGCCGT
CACGTTTGGGTGCCCATTCCAAACAGTCAGTTTCAGATGGGGTGTCAAGA
GAAATCAGAGTCCGACGAAAGTCCGGAGATCTCTATCAGAAAAGTTACGC
CGAACTTGCCGTCACATTTTTATCGCCAAAGCGATCCAAATCCAAATCCT
TTTGCTTGCGATGACGATCCGCTGCTGGTCATCACAGATATGGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGA
CTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGT
TCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACA
GGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATC
GCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCAC
AAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCT
TGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCAT
ATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTG
AGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTT
TCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAACTGCCGGAAA
TCGTCGTGTATTCCCTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGG
AAACGGTGTACAGGGTGAACACTATCCCATATTCACCCAGCTCACCCGTC
TTTTCATTGCATACGAATCGGAGTTGAACATTCATCAAGCGCGGGCCAGA
TGGAATTAAGGCCGATTAAACTTGGCCTATTTCTACGCTTAAAA
UFO08130.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:36:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15471-RC | 528 | CG15471-RC | 56..439 | 9..392 | 1920 | 100 | Plus |
| CG15471-RB | 535 | CG15471-RB | 33..416 | 9..392 | 1920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:36:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4782320..4782703 | 392..9 | 1920 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:36:23 has no hits.
UFO08130.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:46 Download gff for
UFO08130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15471-RB | 16..412 | 2..400 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:21:49 Download gff for
UFO08130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15471-RB | 29..425 | 2..400 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:27 Download gff for
UFO08130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15471-RB | 29..425 | 2..400 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:47:27 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 15:21:49 has no hits.
