UFO08206.5prime Sequence
1222 bp (995 high quality bases) assembled on 2011-07-23
> UFO08206.5prime
CAGTCGACATGCGAGCTAACTCGACGAGATCCTTATCCTGGCACATCCTG
CTCGGACTTTGCCTATGTCTCCTGCAGAACCTCCACCCATCACTTGGCCA
AGATGCAGTGCATCCTAGCGAAGACTTGAACCCAAGCACTGGTCGTAGTC
AGTCGGCGAATAGTGTATCATACTTTAAGGCGTCCATTCCAATGAGAATC
TACGAGTGTCTGCGGGAGTTCACCATGCTACACTGCACGAAATTGTACGT
TCTGCAGAAAATGGAGGAGCGCCGCCAGATGCCAAACAGTGGAAATCTCA
CCCGCGACTTTGTGGATCAGTTCTTCGGGGACGAGACACAGATGGGCAGC
CTGGTGGGCAAGAAGTACCACAAAATGTCCGAAAAGGAGCTCAACCAGCG
GCTGGTTGTTAATTTTCAGCGATTCTTTAAGCATCGTGATCTCAAGATGC
ATATCCTGCCCGGAATGCTGGTGAAGATTGTGCCCAGCAAGGACAACAAA
CTGAAGTTCTCGATCAAGAAGGCACCCAAATCCCGGATGGGTCGTTCCCG
AAGACGTGAGACCGAAGAAATGGACCTGCCCCTTATTAATATTCCGTCCA
TCGGTGGGGGTGGTGCCAATAGTGGAAGTGTGGAGACCTACGAACCGGAA
GCGGAAGGAGATTCCAAGCAGCAGGGGGCTATTGGGGGGCGGAGGAGGCG
TGGCCGGTGGCGAGGGGGGCGGCGGAGGCATTCTGGGCAAGCGCAAGAAA
AAGAACTCGTACAAGGTGACCATGATGCATGTGGCGGTGCCCATGCTGAT
CTTCCCCGTCGTCCTGCTTGGCAGTCTCCTGCCCTTCATCCTGCCCGCCC
TTAAAATGGGCACCACTGTGTCGCTGGTGATGAACAATGGCGCCTTTATG
GCAGCTTTACTGTATGCCGCCCGTACCCAGTTCAACACCCCACGAGGAGC
AGCACATCAGCTACAGGTGCAAGCTTTCTAGACCCATTCGGTTTGGGGCG
GGGGGCCCAGGTAAGGTGGTCATAATCCAATAATCAATAATCAATAAATC
ATAATCCCCAACCAAGCCCTAGGGAGAGTTCCCTGGTCATGACACTAGGT
GCCTGGGAATTCCTCACCCAAATAAAAAACCGCCCGGGCGCGCCACACCG
GAACGCGTTCTGGAAACAAAATCCGAAATATGAGAGTTTCTTGAGAGGGC
CATTTATATTGTGAAATCTCTA
UFO08206.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:13:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15888-RB | 1100 | CG15888-RB | 39..994 | 9..966 | 4650 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:13:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13285978..13286491 | 522..9 | 2570 | 100 | Minus |
| 3R | 32079331 | 3R | 13285052..13285494 | 966..522 | 2035 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:13:56 has no hits.
UFO08206.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:09 Download gff for
UFO08206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15888-RB | 39..1000 | 9..975 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:06 Download gff for
UFO08206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15888-RB | 39..1000 | 9..975 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:26 Download gff for
UFO08206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15888-RB | 39..1000 | 9..975 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:26 Download gff for
UFO08206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13285046..13285493 | 523..975 | 97 | <- | Minus |
| 3R | 13285978..13286491 | 9..522 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:06 Download gff for
UFO08206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9110768..9111215 | 523..975 | 97 | <- | Minus |
| arm_3R | 9111700..9112213 | 9..522 | 100 | | Minus |
