UFO08209.5prime Sequence
1136 bp (996 high quality bases) assembled on 2011-07-23
> UFO08209.5prime
CAGTCGACATGGCAGAAAAAAATAGTTCGAACGATGGACAGTACTTCCTT
CAATCGAAACATTTTATCGATTTTAGACAGAACGAAACGGACACAGTGGA
TTCGGCTATGGATGTAGCTACCAGGCAAAGTGCATCCACCAAAAAGAAGA
TACATATCCACCAAGGACTAGGATCTAGAAAAACGTCAAAGAATATTAAA
CGGAAAATGTCGAAAGCTAGTCAAGACCTGAAAAGAACTTCTAAAACTGC
CGCGAAACCACAGAAGCAAAGGTTATCACAGAGTTTTAAAAAAAGAAATA
TTCCGGAAAAAAAATTTGACAAGTTCCCGCAGGCGGGAGTTTCCCGAAAG
CAGGATGGCAAATTCCGAACCATAACTATCAAAAAGGAAGCACAATGTCG
TCTGCGAACTGCCTTAAAATTACTGGATATCCTTGAAGGGAAATATGATG
ACAGTGATAGAGAATGTTCGTTGGATTCTAAATCCTTACATGGTTCAGTA
AAAAGAAATACCCGTCGATTGCAGACTATGCAGGATCTCCCACCCAGGGA
TTTCTTTGGTCTTTGCAGGGATTGCCGATCACGATGCAGAAATTGTGGCA
GACGTCCTTCGGCTGTCCTTATGGCAAGACGTAAAAGATATTCAGCAAGC
TTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCA
TAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCAT
GACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGC
GTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAA
CAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCA
TCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATC
ACAAACGGCATGATGAACCTGATCGCCAGCGGCATCAGCACCTTGTCGCT
TTGCGTTATAATATTGCCCATGTGAAACGGGGGGCGAAGAAGGTTGTCAT
ATTGCCACGTTTAATCAAACTGTGAAACTCACCCAAGGATTGGCCTGACG
AAAACTATTCTCATTACGTTAAGGAATGGCCAGGTT
UFO08209.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:14:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31804-RA | 856 | CG31804-RA | 102..737 | 9..644 | 3180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:14:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17363597..17364232 | 9..644 | 3180 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:14:06 has no hits.
UFO08209.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:10 Download gff for
UFO08209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31804-RA | 102..741 | 9..649 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:11 Download gff for
UFO08209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31804-RA | 102..741 | 9..649 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:29 Download gff for
UFO08209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31804-RA | 102..741 | 9..649 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:29 Download gff for
UFO08209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17363597..17364236 | 9..649 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:11 Download gff for
UFO08209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17363597..17364236 | 9..649 | 99 | == | Plus |
