UFO08210.5prime Sequence
1069 bp (531 high quality bases) assembled on 2011-07-23
> UFO08210.5prime
CAATCGACATGGCCCCAAGGAAACGGATCTCGAGGATTGCATCACGCAGT
GTGGCGACTGTGGAGCATTTCACTAAGCGCATCAACTGCCGCTCGGTTGG
CACCCAAACCGATATCCTGGCTAAGGGTCCGGCGAAGCGCAAAAAGGTCG
AGAACAAGGTCAAGCTGCTGGATTCACATCCACTGTCGTCCCAGTACTTG
GCCATCCATCTGATGCCGGCAATCAATCCACTGGCAACTGAAACAATAAA
TCGGCGTCCGGATACATTCTCATATTTTCTCCCCGGTCCAAATGAGAAGT
CTTGCCAGGCTGTGGCCGACCGAATCGCTGACGCAAGCGATCGGGTCATC
ACCGCTAGCTCCGGAGAACGGCAAATAAACCACCTGAAGTCTGTGGTGAG
CAACCGCCGCGAAGAGGCCAACCATTGGGATCGTAACCGTCTTGAAATTC
TGCTGGCCCAGATCAGTGGTGACCCGCCGCCGCGCTGGAACTCGGCCACC
CAATTGTGGCTAGAGGTTGACATGCTGGAGAAGCGCATAGAGGCCTACGA
CCAAGAAGAACTGCAGAATGCCAAGAATCGCAATTTGGACAGGAAACTAG
ACGGTGGGCAGGATAAAGGGCCGTCAGATGAAAAGGACCAGCAGACTTTG
AAGACTTTGAAGGCAACGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCG
GGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACA
ACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATA
AAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTC
TGAGGTCATTACTGGATCTATCATCAGGAGTCCAAGCGAGCTCGATATCA
AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTACTGCATAAGC
ATGCTGCTGACATGACGCATCACAAACTGCATGATGACCTGATTCGCCAG
CGCATCAGCACCTGTCGCCTGCATATAATATCCGTCATGAGAAACGGGGC
GATGAGTGTCCATTTGGCC
UFO08210.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:13:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17601-RA | 960 | CG17601-RA | 34..693 | 9..668 | 3195 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:13:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 22547130..22547789 | 9..668 | 3195 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:13:26 has no hits.
UFO08210.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:04 Download gff for
UFO08210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17601-RA | 34..700 | 9..677 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:54 Download gff for
UFO08210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17601-RA | 34..700 | 9..677 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:16 Download gff for
UFO08210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17601-RA | 34..700 | 9..677 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:16 Download gff for
UFO08210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 22547130..22547796 | 9..677 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:10:54 Download gff for
UFO08210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21948966..21949632 | 9..677 | 98 | == | Plus |
