UFO08214.5prime Sequence
1144 bp (1019 high quality bases) assembled on 2011-07-23
> UFO08214.5prime
CAGTCGACATGGCATCTGGGTTCGTGAACAATAAGCGCAAGCGGGATGAA
GCGCACAATCAGTTCATCTGTCCCATTGTCTACACAAATGAGTTGCCCAC
TTATCCAAAGGATTGCAAGTTTCTGCCCTGTGGCCAGAATATCCAGGAGT
ACTGCAAGGAGCCGGTTTCGATTCCCAAACTGGACACTTGTTTTTCGCTA
AATTTCAAAGGACTTCATGAGCTATTCTCCGTTAATTTGATGGATCAGTC
GGCTTACGATAAGCTTTCCGAGAATGTGCAGCCAATGAATCCCAGAGAAG
CTGATCTACTTAAGGACATAAGAGCCCTAGACTGGGACTTCGCCAGACTC
GAACCAAGTCGCGCTCAGGAATGCGCCAAGATGTTCGCCAAGGAGCGAGT
GCATCCACCTCTCCCAGGACTACAGCGTTCTGTGGCGGTGCCCAAGGCCC
CAAAAGACCTGCAGCCGGTCAGCCTGGAGCAACAAAAGGCGATGATTGAT
GCGAGCTTCAAGGATATTGGCAAACCCCTCTACCGACATCCCACCAATCC
GGGTAGCAATGCCTACCCTGTGCAGGTCTTGCCAGTCTTTCCCGATACGG
ATTTGCAGAAATATAGCTTCGTCCAGATGAGTTTTGATAATCCACCCCAA
AATAGCAACCAGGGACTAATCAGGGACTGCGGAAGCTGTCTGATCAACTT
CAGTTTCGTCCAGGACATTGCGGACTCTACCGAAAAGGTTTACGTATCCG
ACCATCGCTACAGAGAGGAAAAAGCCGACGATAGCTTGGAGCGCGGTGAG
GGTTACATACTCCGCGAGGAGAATGACGCCATCTTTTACGTTGGTGTCGA
CAAATACATCAAATTAAGGCGGGAACGTCCACGCCCACACGTTTCGGCTA
ACAAGTTTCTGCTGAGGTCCAGCGGTGTGGGAATGAATACACTACCGATG
CAAGCTTTCTAGACCATTCGTTTGGCGCCGCGGGCCCAGGTAGTGGTCAT
AATCATAATCATATCATAATCATATCACACTAGCCTAGGAGATCCTGGTC
ATGACTAGTGCTGGATTCTCACCAATAAAAACGCCCCGGCGGCAACCGAG
CGTCTGACAATCCCGAATGGAGTCTGAGGTCATATCTGGAATCC
UFO08214.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:14:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12674-RA | 1219 | CG12674-RA | 159..1100 | 9..949 | 4640 | 99.7 | Plus |
| CG12674-RB | 1216 | CG12674-RB | 159..1097 | 9..949 | 4620 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:14:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2080208..2081066 | 56..914 | 4295 | 100 | Plus |
| 2L | 23513712 | 2L | 2080077..2080123 | 9..55 | 235 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:14:20 has no hits.
UFO08214.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:12 Download gff for
UFO08214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12674-RA | 95..1047 | 4..954 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:16 Download gff for
UFO08214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12674-RA | 153..1105 | 4..954 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:33 Download gff for
UFO08214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12674-RA | 153..1105 | 4..954 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:33 Download gff for
UFO08214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2080071..2080123 | 4..55 | 94 | -> | Plus |
| 2L | 2080208..2081066 | 56..914 | 100 | -> | Plus |
| 2L | 2081132..2081158 | 915..941 | 92 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:16 Download gff for
UFO08214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2080071..2080123 | 4..55 | 94 | -> | Plus |
| arm_2L | 2080208..2081066 | 56..914 | 100 | -> | Plus |
| arm_2L | 2081132..2081158 | 915..941 | 92 | == | Plus |
