UFO08225.5prime Sequence
1113 bp (998 high quality bases) assembled on 2011-07-23
> UFO08225.5prime
CAGTCGACATGCAGTGTCCGTTCTTGAACCGCTTCACCGCCAGCTTCATC
CGCAACTACGCGGAGACGCTGTGCCAATCCTACGGGAGCCACTGTCCCGT
GGTTGGGAAGACCTTGGTATCCGGCGAGAAGAAACTTTCACTCGTCGCCG
CAAGTGTTACAAGGTCTCACTCGACGGGGGCGAACGCCCACGCCAATGCT
GGTGGCCCCGCAACTGCCAACGCCACCGCTCCCGTCTCCGCCCCCGCCTC
TGCCGATCCTGGCAAGGCATCCGCCAAGGAGACCTTTCCCTACGAGCGCT
TCTTCAACGAGCAGATCATGAAGAAGAAGCGGGACCATTCCTACAGGGTC
TTCAAGAAGGTGAACCGCCTGGCAGGCGACGGGCTCTTCCCCCACGCCCT
GGAGTACTCGGAGCGGACGGAAAAGCCCATTACGGTGTGGTGCTCCAATG
ACTACCTGGGAATGTCCGCCCACCCCGGCGTCAAGAGGGCCGTCCAGGAC
GCGCTCAATAGGCACGGATCGGGGGCTGGCGGCACCAGGAACATTTCGGG
TAACTCTCTTCACCACGAGCGCCTCGAGAGTAAGCTGGCTGAGCTCCACC
AGAAGGAGGCTGCGCTGCTGTTCACGTCGTGCTTCGTGGCCAACGATTCC
ACTCTCTTTACGCTCGCCAAGCTCTTACCTGGGTGCGAGATCTTCTCGGA
CGCAGGGAACCACGCTTCCATGATTATGGGCATACGGAACAGCGGGGTTC
CCAAGCACATCTTCCGGCACAACGACGTGGACCACTTGCATCAGCTACTG
AAGCAGACGGACAAAAGCGTGCCCAAGATCGTCGCATTCGAGACGGTACA
TTCCATGACGGGGGCCATCTGCCCGCTCGAGGAGCTGCTTGACGTGCCCA
CGAGCACGGAGCCATCACGTTCATCGACGAGTGCACGCCGTGGATTGTAC
GGTGACCACGGGGCCTGGGGTCCGTGAGCGGATGGTGTGCTGAACAAAAA
TGCACATCATATCGGGCACCCCTGGGCAAGGCGTTCGGTATATTGGTGGC
TACATTAGCTGGCACCCATAACTTGATCGACATTGATTCGGTCGTATGCG
GCCGATTCTACTT
UFO08225.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:14:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Alas-RA | 1842 | CG3017-RA | 109..1209 | 4..1104 | 5145 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:14:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23964880..23965980 | 4..1104 | 4895 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:14:43 has no hits.
UFO08225.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:15 Download gff for
UFO08225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Alas-RA | 178..1287 | 1..1113 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:28 Download gff for
UFO08225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Alas-RA | 107..1216 | 1..1113 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:42 Download gff for
UFO08225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Alas-RA | 107..1216 | 1..1113 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:42 Download gff for
UFO08225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23964878..23965987 | 1..1113 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:28 Download gff for
UFO08225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19852401..19853510 | 1..1113 | 97 | | Plus |
