UFO08229.5prime Sequence
697 bp (684 high quality bases) assembled on 2011-07-23
> UFO08229.5prime
CAGTCGACATGACCCACAATCTTGGTATGGCGCCATATCGATTGCCGGGT
CCAGCGGGCGGACTCTGTCCGCCCGATTTTAAGCCGCCGCCTCCCACGGA
CATCATCTCGGCGCCGAGCAATCCGAAGAAGCGGCGAAAAACCTCAAGTG
CCGCCAACTCCGCTGCAGCGGTGGCTGCGGCGGCGGCTGCAGCAGCTGCT
GCGAATTCCATGCAGCAGCAGCAGGCGCCACCCACACCGCAGGATTTGCT
GCCCCCTCCGCCAATGGGAGGCTTCGGAGACACCATTATTGCCTCGAATC
CATTCGACGACAGTCCCCAGGTGTCGGCGATGTCCAGCTCAGCGGCCGCG
GCGATGGCGGCCATGAATCAGATGGGCGGCGGACCAGGAGGTGGTCACTT
TGGCGGCGGTGGACCGGGTGGGCACCTGCACTGGGAAGACCGCATGGGCA
TGGGCGGTGGACCTCCTCCCCCGCCTCACATGCATCCCCATATGCACCCG
CATCATCCAGGCGGACCTATGGGTCACCCACTTGGCCCACATCCGCACAT
GGGTGGTCCACCTCCAATGCGAGGAATGAGCCCCCATGCACCCCCCATCA
AATGGGACCGGGACCAGGCGTCGGACTACCGCCCATATGAATCACGGAAG
GCCAGGGGGGACCTGGTGGTCCTGGAGAATCCGTCCCTTTGGGTATT
UFO08229.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:14:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pygo-RA | 4507 | CG11518-RA | 1003..1687 | 9..695 | 3250 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:14:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31578946..31579630 | 695..9 | 3150 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:14:52 has no hits.
UFO08229.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:17 Download gff for
UFO08229.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pygo-RA | 984..1680 | 1..697 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:32 Download gff for
UFO08229.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pygo-RA | 984..1680 | 1..697 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:47 Download gff for
UFO08229.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pygo-RA | 993..1689 | 1..697 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:47 Download gff for
UFO08229.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31578944..31579637 | 1..697 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:32 Download gff for
UFO08229.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27404666..27405359 | 1..697 | 97 | | Minus |