Clone UFO08229 Report

Search the DGRC for UFO08229

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:82
Well:29
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcriptpygo-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO08229.5prime Sequence

697 bp (684 high quality bases) assembled on 2011-07-23

> UFO08229.5prime
CAGTCGACATGACCCACAATCTTGGTATGGCGCCATATCGATTGCCGGGT
CCAGCGGGCGGACTCTGTCCGCCCGATTTTAAGCCGCCGCCTCCCACGGA
CATCATCTCGGCGCCGAGCAATCCGAAGAAGCGGCGAAAAACCTCAAGTG
CCGCCAACTCCGCTGCAGCGGTGGCTGCGGCGGCGGCTGCAGCAGCTGCT
GCGAATTCCATGCAGCAGCAGCAGGCGCCACCCACACCGCAGGATTTGCT
GCCCCCTCCGCCAATGGGAGGCTTCGGAGACACCATTATTGCCTCGAATC
CATTCGACGACAGTCCCCAGGTGTCGGCGATGTCCAGCTCAGCGGCCGCG
GCGATGGCGGCCATGAATCAGATGGGCGGCGGACCAGGAGGTGGTCACTT
TGGCGGCGGTGGACCGGGTGGGCACCTGCACTGGGAAGACCGCATGGGCA
TGGGCGGTGGACCTCCTCCCCCGCCTCACATGCATCCCCATATGCACCCG
CATCATCCAGGCGGACCTATGGGTCACCCACTTGGCCCACATCCGCACAT
GGGTGGTCCACCTCCAATGCGAGGAATGAGCCCCCATGCACCCCCCATCA
AATGGGACCGGGACCAGGCGTCGGACTACCGCCCATATGAATCACGGAAG
GCCAGGGGGGACCTGGTGGTCCTGGAGAATCCGTCCCTTTGGGTATT

UFO08229.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:14:54
Subject Length Description Subject Range Query Range Score Percent Strand
pygo-RA 4507 CG11518-RA 1003..1687 9..695 3250 98.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:14:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 31578946..31579630 695..9 3150 98.5 Minus
Blast to na_te.dros performed on 2014-11-27 00:14:52 has no hits.

UFO08229.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:17 Download gff for UFO08229.5prime
Subject Subject Range Query Range Percent Splice Strand
pygo-RA 984..1680 1..697 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:32 Download gff for UFO08229.5prime
Subject Subject Range Query Range Percent Splice Strand
pygo-RA 984..1680 1..697 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:47 Download gff for UFO08229.5prime
Subject Subject Range Query Range Percent Splice Strand
pygo-RA 993..1689 1..697 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:47 Download gff for UFO08229.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 31578944..31579637 1..697 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:32 Download gff for UFO08229.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 27404666..27405359 1..697 97   Minus