UFO08305.5prime Sequence
1126 bp (1012 high quality bases) assembled on 2011-07-23
> UFO08305.5prime
CAGTCGACATGGCGCTAAATAGTTTACCTATAGTCCTGGCATTGGTAGTC
TTGGCTCAAGGAGCAAGCTTTGGGCAGGACGAAAGACTGCGCTATGACAA
CTACTCGGTTTATAAAGTCAAGTTTGAAACTCAGGCGCAGAGAAGTATCC
TAAGGAAGCTTGCAGAAGATCGAGAAAATTTCAGGTTGTGGCATGAAGCC
AAGGATGAGTTACACCTGATGCTAAGTCCAGGTGCCTTTGGCGAACTTGA
GACTGAAATTCAGAAAACCAATGTCACTGCAGAGCTGTTCATCAGCAATG
TGCAGGAACTCATCGATTCGGAGGAAGCTGCCAATCTGAAAGCCAGCAGA
GATGGAACATTTGGTTGGACGAAGTACAATTCTCTGGCCGAAATTTATGC
TTGGTTGGACGATATACTAGCTGCTTATCCAACGATAACAGAGAGTTTTA
TAGTGGGTCAATCGTACGAGGGACGCACCATTCGGGGCATAAAGATCTCC
TATAAGTCGAATAACCCAGGTGTGCTTATTGAGTCCAATATACATGCAAG
GGAGTGGATCACCTCTGCGACAGCCACTTGGCTGATAAACGAGTTCCTTA
CCTCTACGGATGAATTAGTGCGGGATCTTGCGGAGAATCACGACTGGTAT
ATAGTGCCAGTGCTGAATGTCGACGGTTTTGTGTACACTCATGAAAAGGA
TCGCATGTGGCGAAAGACCCGTCAACCCTCCGAAATTTCTAGTTGCATTG
GAGCAGACCCCAATCGAAACTACGATTCGCATTGGATGGAGAACGAGGGG
GCTTCTTCGAATCCCTGTGCTGAGGATTACGGTGGACCCAAGCCCTTTTC
GGAGCCTGAAATCCAGGCCATGTCTGAGTTTGTAATCAGCATCAAGGATA
AATCAATGTTTTGCTCGCGTTCCACTCGTATAGTCAGCTTTTGCTCTCTC
CCTATGGACCCACTAAAGAGAGTTTCCTCCCAATTTTGATGATATGATGA
GTGCTAAGCCCTATTGGAGAATGCTGTTGAAAAGCCTACCTATGGAACCG
TTACCGATACGCTCAGCCTGCGGGCATTCTTTATCCGCGTCTGGACCACA
TCGAATGGCCTACCATGACAGATTGA
UFO08305.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:15:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7025-RA | 1350 | CG7025-RA | 14..1121 | 8..1108 | 5120 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:15:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7691869..7692260 | 699..308 | 1960 | 100 | Minus |
| 2L | 23513712 | 2L | 7691511..7691815 | 999..697 | 1410 | 99 | Minus |
| 2L | 23513712 | 2L | 7692499..7692670 | 179..8 | 860 | 100 | Minus |
| 2L | 23513712 | 2L | 7692320..7692447 | 307..180 | 640 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:15:37 has no hits.
UFO08305.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:23 Download gff for
UFO08305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7025-RA | 7..1121 | 1..1108 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:53 Download gff for
UFO08305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7025-RA | 7..1121 | 1..1108 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:05 Download gff for
UFO08305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7025-RA | 7..1121 | 1..1108 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:05 Download gff for
UFO08305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7691426..7691813 | 699..1082 | 95 | <- | Minus |
| 2L | 7691870..7692260 | 308..698 | 100 | <- | Minus |
| 2L | 7692320..7692447 | 180..307 | 100 | <- | Minus |
| 2L | 7692499..7692677 | 1..179 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:53 Download gff for
UFO08305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7691426..7691813 | 699..1082 | 95 | <- | Minus |
| arm_2L | 7691870..7692260 | 308..698 | 100 | <- | Minus |
| arm_2L | 7692320..7692447 | 180..307 | 100 | <- | Minus |
| arm_2L | 7692499..7692677 | 1..179 | 97 | | Minus |
