UFO08308.5prime Sequence
1113 bp (1011 high quality bases) assembled on 2011-07-23
> UFO08308.5prime
CAGTCGACATGGGCAGCGGATCTGAGCTTCCACTACGGATCTGTATGGTC
TGGCTGGTCGCGGGTCTGGCGATTGGCGAGGCACTCCGGTGCTACGAGTG
TGTCGATCAGGAGACGTCGTGCGGATCTGCTGATAATTCGCCGGGAAGAG
TGCGAGAATGCCCGAACTCAACCATGTGCTCGACCACCATGCTGACCACA
ATGGTGAATGGAAATGAGTGGATCAGGGTGAGGCGAGGCTGTGCCAAGCA
GGTGGATCATTACTTTGACTATATTGGAAAGCATTGGGAGCAGAAGTATC
GACTGATGGACTTACCGGAGGGCTGCAAGAAGGAGAATGGAAGGATGAAT
TGCAACTGTCGCGGAGAACTGTGCAATTCAGGAAGTCATTCGACACCAAA
TTTCCGGTTGCCGTTCGTGCTGATCTTATTGGCCCTGGTCTGCGGCAAAA
TCCTTCTTCCCGTCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCC
CAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTA
GCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAA
ACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAG
GTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATT
ACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATT
CTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAG
CGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAA
CGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTG
AAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCATAAACCCT
TTAGGGAAATAGGCCAGGTTTCACGTACACGCCACATCTGCGAATATTTT
GTTGTAGAAACTGCGAAATCGTCTGCTATCACTCCAGAAGCGATGAAACG
TTCAGTGCTCATGAACGGGTACAGTGAACCCTATCATATCACCAGTCACG
CTCATGCATACGA
UFO08308.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:15:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8501-RB | 629 | CG8501-RB | 18..474 | 8..464 | 2270 | 99.8 | Plus |
| CG8501-RA | 1077 | CG8501-RA | 466..922 | 8..464 | 2270 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:15:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12383909..12384365 | 8..464 | 2270 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:15:46 has no hits.
UFO08308.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:25 Download gff for
UFO08308.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8501-RA | 282..746 | 1..464 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:57 Download gff for
UFO08308.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8501-RA | 458..922 | 1..464 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:07 Download gff for
UFO08308.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8501-RA | 458..922 | 1..464 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:07 Download gff for
UFO08308.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12383901..12384365 | 1..464 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:57 Download gff for
UFO08308.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8271406..8271870 | 1..464 | 98 | == | Plus |
