UFO08310.5prime Sequence
1135 bp (1025 high quality bases) assembled on 2011-07-23
> UFO08310.5prime
CAGTCGACATGAACAAGGACAACTCCAGCATGAAAATGGATCCGCAGCTA
GCCCTACGCCTCCTGGCTGATGGCGGAGTGCTGGTCATCGCCGGTGTACC
CGAGGGCACGGAATTCGGCATTGATCTTTGTGCCTACACCATTGGTCCGG
ATTTCCGAGGCGTCAAGATGATTCCACCCGGAGTCCACTACGTATGGTGC
TCCTCCCGTGGTCCCTACGGCGATGCAGCCCCTCGTGTTGGATTCGTGCA
CTTCTTCCATCCGAATGAGATTGTCGTACGAGAGTGGGACCACGAACTGG
AGGAACTGCGCCCGCGGAGGATTGCCGAACCGGAAGTAGAGCGAGACCGA
ATCCGCAAAAACCTAGCCCAACTGGAGCGCGTGCTGGCGCCGTACGACTA
TCGTTACGTGGTCCAGTGGAAGGAACTCACCGGCAGCGTGACGGAGTCTT
GCGTGGATCGCTGCCGTCCGACAGAAGGAACCATCCGTACGAACATCGAA
CTGCAATCCTGCCCGGACGCAGATCGGCCGCGAGGTGGAGCCGCTACTGT
CAGCATAAGCCGCCGGAATGCTGCAGCTCGGATTCTCTTAGATGAGAGCG
AACTCCTACCGGACCTTAAGCCCGTGGAAGGAACAGCTCCGCGCTTCACT
ACCGTACCCCTGCGTGTTCCACAAGATGCCCTGCCCGCTGATGTTTCCCG
CCATGCCTTGGACTGCATCGATGCTGTTGACAAACTGCTCGAAGGCTTTG
AAACGGCCGATGGACTCATTGAGGAACTGCAGCTGGCTTACGCATTTTTC
CTAGTGGGCTACTCTGTGGAGTCTCTGGCCCACTGGCGCAAGCTTTTGGG
CTTGCTGGCTCACTCGCAACGGCGGTCACCAAGCACAAGTTAACGTACAT
GAAATACAGCGAGGTTTTGGCCCACCAGCTGCCCCATCTGCCCGAGAGCT
GATGGTGCCTGTCGCATAACACGTCTACAAGATGTACGCGAGCTGCTGGT
CAATCTGCATGCGGGCGCTTAGTGTCCAGCGCCTGGGCGGCTAACTAGCG
GCTGGAGGAAAATTTGGGAATGGGTATCGAGGCTTGCTTAGAACGAAGGA
ATCCCGAGGACAGCTGTATCATCGGACCTCCGGGA
UFO08310.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:15:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12320-RB | 1666 | CG12320-RB | 36..1167 | 9..1133 | 5005 | 97.2 | Plus |
| CG12320-RA | 1237 | CG12320-RA | 36..1167 | 9..1133 | 5005 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:15:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18251685..18252699 | 1017..9 | 4735 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:15:14 has no hits.
UFO08310.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:20 Download gff for
UFO08310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12320-RA | 26..1110 | 1..1082 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:43 Download gff for
UFO08310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12320-RA | 26..1110 | 1..1082 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:57 Download gff for
UFO08310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12320-RA | 32..1116 | 1..1082 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:57 Download gff for
UFO08310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18251619..18252703 | 1..1082 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:43 Download gff for
UFO08310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14077341..14078425 | 1..1082 | 97 | | Minus |
