UFO08314.5prime Sequence
1098 bp (990 high quality bases) assembled on 2011-07-23
> UFO08314.5prime
CAGTCGACATGGTCACCTGCGGCCGGCAAACGTTCAACATGCTGCCCATG
GCGCCGACGAGTCCTTTTGTGAGCAGCAGCTCCTCGGTGGCCGCATCCTC
GACTTCCGTTTCCGCCAGCAGTACCGTTTCCGCCTCCGCGAGCAGCAAGC
CCAAGCTGGCCTTCAGCATCGACTCGATTGTGGGCGAATCCTCGACGAGA
TCGGCTCCACTAAGGGTCAGTGTGATATCTTCGCCGCCGCCGCGCAGCGA
AAGTCCCGCTTCGCCAACGAACACGAACAACAGTGGGCGCCGGACGCCCA
GGGGCTATATCTACTGCCGCAGAAGGGATTCGCTGGATCGATCGCGCAGT
CCTCAGAGATCACCGGTTAGCCGGTCGCCATCGCCCCCCAATGCAGGAGG
CAATCCGGCAGCGGCCGGGAATACTGCAAAGTCCGGGGATCCATCGTCGG
GAACGGGAAATCCTCCAACCCTCATCCGTCCGTTGCCTCTGCCGGCGCCA
AATCTAGCTTTAATTGGGAACCGCACCTCACCGAACGCCATGGCGGTGCG
CATGGCGGGTCCGCCCCACCCGCCGTCGCAGCCACCGCCGTTCCTTGCCG
CCCAGTTCCAAATGGCTGCTGCACTGGCTCATCATCACCAGCAGCAACAG
CAGCAGCAACAACAGCAACTTCCGCCCGTGCCAACTGGACCGCCACATGG
TCCACATCCGCATCTGCCGCCCGGCCAAATTCCACTTGGAATCTTTCCCG
GCGGACCGCATCCCGGGCATCCTCCGCCCCACGGACACCATCCGTTCGGG
AGTGCGCCGCATCTGATCCGGGATAGCTATCCGTTGTATCCATGGTTGCT
CAGCCGACACGGACGCATTTTTCCACGATTCCCAGGCAATTTCCTGTTCC
AGCCATTCGCAAGCCAAGCGGGTGCGCACCGTCTTCTCGCCGACGCAGCT
ACTCAAGCTGGAGCAACGCCTTCGAGGGGAACCACTACGTGTGAGCCGAA
CGAAGCAGTTGGCCCAGGACTCAACTGACCAACGCAGGTTAGGCTGGTTC
CGGACGACGTCCCATGCCCAGTGAATGCGCAAGAGGGCGTCAATGTCA
UFO08314.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:15:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| E5-RA | 2122 | CG9930-RA | 395..1490 | 9..1089 | 4895 | 97.3 | Plus |
| ems-RA | 2478 | CG2988-RA | 1390..1564 | 820..990 | 270 | 78.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:15:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13873300..13874179 | 888..9 | 4400 | 100 | Minus |
| 3R | 32079331 | 3R | 13868653..13868756 | 991..889 | 360 | 96.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:15:09 has no hits.
UFO08314.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:19 Download gff for
UFO08314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E5-RA | 395..1436 | 9..1041 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:40 Download gff for
UFO08314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E5-RA | 395..1436 | 9..1041 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:54 Download gff for
UFO08314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E5-RA | 395..1436 | 9..1041 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:54 Download gff for
UFO08314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13873300..13874179 | 9..888 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:40 Download gff for
UFO08314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9699022..9699901 | 9..888 | 100 | | Minus |
