UFO08320.5prime Sequence
1151 bp (1036 high quality bases) assembled on 2011-07-23
> UFO08320.5prime
CAGTCGACATGCTAGCCTGCAAGCTTCTTCTCGCGTTGGTCATGGGAATG
CACTGCATTCAATTGTTGATGGCGGCCTGCGTGTGCTCCGAAAAGGGAAC
GGACTACTGCCAAAGCTGTCAGGGATCCACGGTCATCCGGCCGAAGCCCC
GATACTACGAGCCCAGTGACGTTAACCTGCCGCCGATCGGAGACAACTGC
TGGTGCAGCAAGCAGCTGATCGAACCCGCCCAACTGCCCAAGACCTGCGG
AAAAACCACGCCATGCAAGCCCACCTGTTCGTGCCAGCAGATCAGCTCCG
ACAGCAGCTACGCCTCCTCTTCCAGCTCAGGATCCGTGTACGGAAAAATC
GACTATGCCGCAGAGAAGATAGTGGACAACAGTCCAGCTGCGGATCCCAT
CAGCGTGAGTCTGGCCGCCCAGGCTGGAAAGGCCATCAATGTGCCGGAGG
CCAAGTTGGCCTACGGATTTGCCCAGAAGCCCGTCGATGGTGAGAAAAAG
GTGGTGTTCTCCAACGTGCCCGAGGAGAATCTCTTCAAGCTGAAGAGCGA
CGTGATCACGCTGAAGAAGCGCACCTATGCGACCAAGCAGGAGGATGAGG
AGGAGTACGCCGAGGAGGAGCAGGAGCAGGAACAGTCCTCCGATGATGAG
GAGGCACCGCAACTCACCTACAAACAGCTGGGCTACATCACCGAGCAATA
CAAGAACCCCAAGTTCAGGAAGATCAGCAGTTCCAGCTCCAGTTATGCGT
ACAAGGACTACAAGGATTCCAGCGAGAGCGGCTACGGTAAAGTGGCCGGC
AAGGTGTCCGTGGACTGTGGCTTCAAGCCCGGCCGGATCACCTCGTACCG
GAAGTCAAAACGAGAGGAGTCCGACGACGGTTACTACGCAAGCTTTCTAG
ACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGTCATAATCATAATCATA
ATCATATCATAATCACACTAGCCTAGAGATCTGTCATGACTAGTGCTTGA
TTCTCACCAATAAAAAACGCCCGCGCAACGAGCGTTCTGACAATTCAGAT
GGAGTCTGAGTCATTACTGATCTATCACAGGATCAAGCGAGCTCGATATC
AAATAGCCGCCTGCACCTTCTAATCGAGATCTGTGTGAAATCCATAAGCA
T
UFO08320.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:16:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cp7Fa-RA | 1033 | CG33962-RA | 31..911 | 7..887 | 4405 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:16:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8472425..8472965 | 347..887 | 2705 | 100 | Plus |
| X | 23542271 | X | 8471382..8471571 | 65..254 | 950 | 100 | Plus |
| X | 23542271 | X | 8472264..8472355 | 255..346 | 460 | 100 | Plus |
| X | 23542271 | X | 8470918..8470976 | 7..65 | 295 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:16:08 has no hits.
UFO08320.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:28 Download gff for
UFO08320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp7Fa-RA | 24..915 | 1..891 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:12:08 Download gff for
UFO08320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp7Fa-RA | 24..915 | 1..891 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:14 Download gff for
UFO08320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp7Fa-RA | 24..915 | 1..891 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:14 Download gff for
UFO08320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8470911..8470976 | 1..65 | 93 | -> | Plus |
| X | 8471383..8471571 | 66..254 | 100 | -> | Plus |
| X | 8472264..8472355 | 255..346 | 100 | -> | Plus |
| X | 8472425..8472969 | 347..891 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:12:08 Download gff for
UFO08320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8364944..8365009 | 1..65 | 93 | -> | Plus |
| arm_X | 8365416..8365604 | 66..254 | 100 | -> | Plus |
| arm_X | 8366297..8366388 | 255..346 | 100 | -> | Plus |
| arm_X | 8366458..8367002 | 347..891 | 99 | == | Plus |
