UFO08328.5prime Sequence
1027 bp (148 high quality bases) assembled on 2011-07-23
> UFO08328.5prime
CAATCCACATGGGTTCATGCCTTGGCAGCTGTGCCACAGCTGCCGCCGCA
CCAGCCCACTCCGCCTGCACCTCAACGTCCGACTCCACCACCCACTCGAC
TTCCTCGACGTCGTCTTCACTGACAACTCCCCCCACGTCCTGGGTGGCCA
ACAGCTGGCTCTGGGGAAAGAACAGATCTGCAGGAAGACAAGATCCAGAG
GCAGATCTCTTATCGAGGACCACCAGGCAGCGCTGCCAACGGAACGGATT
CATCTACCGCATCCTGCGGCTCAAGAAAAGGCAGCAGTGTCCCAACTTCC
TGGACAAGTACTGGGAGCAGCACCCCAGCTACGCCAAGCTGCCGACCACC
GCCATGGCGGACATTCAAATGCAGAACCTGGACGCCGGCAAGTTGCTCAA
CGCCCAGACCACGCCCAGTCGGGAGACGGAGATGGGACTTGGAGCCTACC
AGCGCATGGCCAACTCGCGGGCCAGCTCCTCCTTGGATCTCGAGTGGGAA
CACGAGTACTCACAGCTGCGGCAGTATCAGTACCAGTGCCAGCAGGTGCC
CAAGGAGCTGCCACCAACGCCACCAAAGCCGCGCTACGCATCCTTAGACC
AGCTGGCGGCAGCCAATGCGATGGCCACCAGCCAAGGACGACACATGGCG
CGCCAAGCCAGACTGAGTTGCCAGCGCCACGGAGGTTCGCTCACGCGGAA
CTCGTGCTGTTCGTCTACACATAACTCCTGGTCGCACATATCCACGCCAG
AGTCGCTGGAATGGGACGTGCACGAGGAGCGAGAGCAGCAGCGTCAGCTT
CGTCTGGAGGATGACAATCTGGATGATAGAACGCTCAGTTGCTGCATCAG
ATCTAGCAATTGAAGCATCGTGTACTGCAGGAGACTGGCGATGGACTCAG
CATGGTATCAGCTGCAGTCGAGAGCTCACCGAAGGTCTTCATGTCTGGCA
ACGCACTTCGCTGGCGACTCCCAGCTGGAAGGTCCTGTTACTGCAAGCCT
TTCCTAGAACATTCGGTTTGGGGCGCG
UFO08328.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:16:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13982-RB | 1726 | CG13982-RB | 389..1363 | 8..979 | 4560 | 98.1 | Plus |
| CG13982-RA | 2643 | CG13982-RA | 389..1363 | 8..979 | 4560 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:16:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6413423..6414055 | 350..979 | 2820 | 97.5 | Plus |
| 2L | 23513712 | 2L | 6413183..6413366 | 166..349 | 890 | 98.9 | Plus |
| 2L | 23513712 | 2L | 6412703..6412859 | 8..164 | 785 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 00:16:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 4160..4230 | 513..584 | 123 | 65.3 | Plus |
UFO08328.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:32 Download gff for
UFO08328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13982-RA | 382..1372 | 1..988 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:12:17 Download gff for
UFO08328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13982-RA | 382..1372 | 1..988 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:25 Download gff for
UFO08328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13982-RA | 382..1372 | 1..988 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:25 Download gff for
UFO08328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6413181..6413366 | 164..349 | 98 | -> | Plus |
| 2L | 6412696..6412858 | 1..163 | 97 | -> | Plus |
| 2L | 6413423..6414064 | 350..988 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:12:17 Download gff for
UFO08328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6412696..6412858 | 1..163 | 97 | -> | Plus |
| arm_2L | 6413181..6413366 | 164..349 | 98 | -> | Plus |
| arm_2L | 6413423..6414064 | 350..988 | 97 | | Plus |
