UFO08339.5prime Sequence
1142 bp (1026 high quality bases) assembled on 2011-07-23
> UFO08339.5prime
CAGTCGACATGCGATTCATATTTGTTCTGCTCTTGGCCCTTCTCGGCTGC
CTCCTGTTTGCCCAGCAGGGCTGCGAAGCTACGGGAACGAGCACTGAAAG
CTCCTCGGATAGTACCAGCGCCTCGGACACCTCCACTACCGCGTCCTCTT
CCTCCGACACAACTGAAGCCTCAACGTCTTCCGACACCACCACAGTGGCC
TCGTCTGCCACGACTACCACCACTTCTTCGTCCTCGTCCTCGTCGTCGTC
CTCCAGCGCGGCCGCCCGTCGTCGCAGGGCCGCCGCCCGTCGTCGTCGCT
TGGCCCGCCAACGGCGCAGGCGCCAACAGCGCCAAAGGCGCCAACAGCGC
CAAAGGCGCCGCCGCCAACAGCAGCGCAGAAGACGCCAGCAAAGGCAGCG
CAGTGGAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAA
GTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGG
AGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCG
GCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTA
CTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCC
GCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGA
CATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATC
AGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGC
GAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCA
CCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGG
AAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTG
TAGAAACTGCCGGAAATCGTCGTGATATTCACTCCAGAGCGATGAAAACG
TTTCAGTTGCTCATGAAACGGTGTAACACGGGTGGAACACTATCCATATC
ACCAGCTCACGTTCTTTCATGCATACGAAAATTCCGGATGAAACATTTCA
TCAGCGGCCAGACGGTGGATATGGCGGAATAGACACTTGTGC
UFO08339.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:17:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14453-RA | 566 | CG14453-RA | 20..418 | 9..407 | 1995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:17:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22694102..22694500 | 9..407 | 1995 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:17:13 has no hits.
UFO08339.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:38 Download gff for
UFO08339.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14453-RA | 1..406 | 3..407 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:12:36 Download gff for
UFO08339.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14453-RA | 14..418 | 1..407 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:37 Download gff for
UFO08339.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14453-RA | 14..418 | 1..407 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:59:37 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 16:12:36 has no hits.
