UFO08340.5prime Sequence
1138 bp (1031 high quality bases) assembled on 2011-07-23
> UFO08340.5prime
CAGTCGACATGGCCATCCCATTTTTCGAAGAAGAGCACGCCCCGAAATCG
GAACCCAGTGGCGATCAAGTCGATAGCCCCATGGCTTTCTCCATAGACCC
CGGACATGATCAAGTGGACTTTGAAGGACCTCCGTCTGCAGCAGAGGAAC
TCCCGCCACCAGGAGCAACAAGTGAGCCAGTTGCGCCTCCGAGTGCCGAG
GAGCAACTGCTGGCCTGGAAATTCCTGGCCATCACCATGTGCAAGGTCCT
GAAGCAATTTTACCAACAGCACAAGTCGTCCGGAAAATCCAGCAAACTAA
AGGCCACCGTTCAAATACAACCGCAGGCGCAGGCAAGCTTTCTAGACCAT
TCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCA
TAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTG
GATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAA
TCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAG
CGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGT
TGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATG
ATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAAT
ATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACG
TTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAA
CATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAAC
ACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGG
TATTCACTCCAGAGCGATGAAACGTTTCAGTTTGCTCATGGAAACGGTGT
AACAAGGTGAACACTATCCCATATCACCAGCTCACGTCTTTCATGCATAC
GAAATTCCGGATGGAGCATCATCAGGCGGGCAGGATGTGAATAAGGCCCG
GAATAAACTGGTGCTTATTTTTCTTAACGTCTTAAAAAGCGTAAATTCAG
CTGACGGCTGTTTAAGGTACTGGACACTGACTGAATGC
UFO08340.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:17:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| skl-RA | 1382 | CG13701-RA | 116..439 | 9..332 | 1605 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:17:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18439504..18439827 | 332..9 | 1605 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:17:18 has no hits.
UFO08340.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:38 Download gff for
UFO08340.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| skl-RA | 111..444 | 9..342 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:12:37 Download gff for
UFO08340.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| skl-RA | 116..449 | 9..342 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:38 Download gff for
UFO08340.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| skl-RA | 116..449 | 9..342 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:59:38 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 16:12:37 has no hits.
