UFO08341.5prime Sequence
1108 bp (1026 high quality bases) assembled on 2011-07-23
> UFO08341.5prime
CAGTCGACATGGAGAATCGCTTATTAGTTATATGGCTGCTTCTTGCCATC
GCCACGGCATTGGTTAAGGCCGAACTTACAGATATATCCGCTATCTGCAG
GATATCCGATCCCTGGCAAATGCTGCCCCACAAAGACCACTGCCAAAGGT
TCTATGTTTGCACTGGCGACGATGACATGCCCTTCCAGGAGTTCAACTGT
CCGGCGGAGTACCATTTTAGCAAGAAGCTCATGATTTGTGTACCCGGAGC
CTGCACCGATGAATCCGTATTTTGTGGACTTACGAATAGTGTGGAGCGAG
TCCAAAGCGATTGCACGCGATACCGACAATGCCTGGAGGGAGGATCCTTC
GCCGTGGCCAAATGTTCCGTCGGAAACTACTTTGATCCAGCCCGAAGAGC
CTGCCTCCCAGTGGCCATAAGTGCGGCCCATCAGTGCAGCTGTGTGCTGC
CGGATAATGCCACCCTGGCGAATCCAAGCGACTGCGAGACATATTTCCGC
TGTCACTCCGGACAAGCGGAGCTGGTCCAGTGTCCATCAGGAGACTACTT
TGACGAACGAGTGAGCAGCTGTGTGCCGGATCACACGGGAATTTGCCTGG
AAAAGCCCACAATGCCGCCGACACTCACAGAGCAAGCTCTTGCCATGGAC
GAGTGCATCCGGACGGGCAGCCGCCTGGCACCGCACAGCCGAGATTGCCA
ACGTTACTACATATGCGCCAAAAAGAGGGTGCTGGAAATGCGCTGTCCGA
GGGGTCAGTATTTTGACGTTGTACGGCGCTACTGCGCTCTTGATCTGGGA
AGCGAATGCCAGGCTCTGCAGGCCGAGAAACAAGACCTGGAGCTGGAGGA
GAATATTCAGGTAGAGCTGGAAAGATATCCAGATGGACATTCCAGCGAAA
CATAAGGTAAAGATCAGGACACAAGCCGGTTCAGAGACTCCGAAAGGAGT
GTCCGCGACCAGGATTACCAGTGCCGCAGCTATGACAACTTCACAGCCTC
AGCCGAGGCAGTGAGCAGCTACGATAGGTTCTCCGTCGAGGTCATTCCAT
GGCAAGCTTCAGACAATCGTTGGCGCGCGGGGCAGTAATTGATCTAATCA
AAATCCTA
UFO08341.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:17:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-J-RA | 1235 | CG7348-RA | 48..1092 | 9..1039 | 4815 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:17:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20130599..20131631 | 1033..16 | 4470 | 97.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:17:23 has no hits.
UFO08341.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:39 Download gff for
UFO08341.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-J-RA | 36..1103 | 1..1051 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:12:40 Download gff for
UFO08341.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-J-RA | 39..1106 | 1..1051 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:40 Download gff for
UFO08341.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-J-RA | 39..1106 | 1..1051 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:40 Download gff for
UFO08341.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20130581..20131633 | 13..1047 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:12:40 Download gff for
UFO08341.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20123681..20124733 | 13..1047 | 97 | | Minus |
