UFO08353.5prime Sequence
1113 bp (1019 high quality bases) assembled on 2011-07-23
> UFO08353.5prime
CAGTCGACATGGGTCGCGCCGAGGTAGGTACGCCCAAGTACCTCGCCAAC
AAGATGAAATCGAAGGGTCTGCAGAAGCTGCGCTGGTACTGCCAGATGTG
CGAGAAGCAGTGCCGCGATGAAAACGGCTTCAAGTGCCACACGATGAGCG
AGTCCCACCAGCGCCAGTTGCTCCTCTTTGCGGACAATCCTGGCAAATTC
CTGCACAGCTTCAGCAAAGAGTTCTCCGACGGCTACATGGAGTTGCTGCG
CCGGCGGTTCGGCACGAAGCGAACCAGCGCCAACAAGATCTACCAGGAGT
ACATTGCCCACAAGGAGCACATCCACATGAACGCCACCCGATGGCTCACC
CTGTCCGACTACGTGAAGTGGCTGGGCCGGACTGGGCAAGTGATAGCGGA
TGAGACGGAGAAGGGCTGGTTCGTCACCTACATTGATCGCAGTCCAGAGG
CCATGGAACGACAGGCGAAGGCTGATCGCAAGGAGAAGATGGAGAAGGAC
GACGAGGAGCGGATGGCCGACTTCATTGAGCAGCAGATTAAAAATGCCAA
GGCCAAGGACGGCGAGGAGGACGAAGGCCAGGAGAAGTTCACCGAGCTAA
AGCGCGAAGAGAACGAACCACTCAAGCTTGATATTCGCCTTGAGAAAAAG
TTCCAGCCTGACACTGTGCTAGGGAAATCCGCTCTAGCCAAGCGACCTGC
CCCTGAAGCTGAAGAAAAGGTGTTCAAGAAACCCAAATCCGTGGCTGGAG
ACAGCCAAACGCGGTCGGTGCTGGACGAGATCATCAAGCAGGAGGAAAGC
AAAAAGGAGCGTGCCAACCGCAAGGACTACTGGCTGCACAAGGGTATCGT
GGTCAAATTTATTTCCAAATCCATGGGCGAAAAGTTCTTCAAACAAAAAG
CGGTTGTCCTGGACGTAATTGACAGATATCAGGCAAATCAAGTTCTTGGA
GACTGGGGAAAGCTAAAGTGGATCAAGCCTCATTGAGAACGTATCCCGCT
TTGGACAAGCCTGTCATGGTGTAATGGCGCCTTATCGGGATCCGGAGCTC
CTGCTAGAACTGGACGAGCGCAAATTCAAGGTTCACCGCGTGAATATGCC
GGGTCCTCTCAGG
UFO08353.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:18:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kin17-RA | 1453 | CG5649-RA | 91..1165 | 9..1072 | 4935 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:18:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20356897..20357851 | 9..961 | 4695 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:18:16 has no hits.
UFO08353.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:46 Download gff for
UFO08353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kin17-RA | 82..1175 | 1..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:13:03 Download gff for
UFO08353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kin17-RA | 84..1177 | 1..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:58 Download gff for
UFO08353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kin17-RA | 84..1177 | 1..1085 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:58 Download gff for
UFO08353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20356890..20357868 | 1..976 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:13:03 Download gff for
UFO08353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20349990..20350968 | 1..976 | 99 | -> | Plus |
