UFO08358.5prime Sequence
1131 bp (1036 high quality bases) assembled on 2011-07-23
> UFO08358.5prime
CAGTTCGACATGTCAACCGACGCCGACCTAAACAAGTGCGTCAGTCCCAT
GTACCAGGTGTCAACCGCAGGCGACGGCCTCCAAGCAGAAGCCGCTGGAG
ATCTGGCGTTGGCCTCCATTGTCGCAGCTCCCTCCTATTCCTGCGAGCCA
CAGAAGGACTCCACCGACATGGACGTGGACATGGAGATAGACAACGATCT
TACCACTAGCGAACGGATGCCAACGGTGGCCGAGCTGGAGCAGCCGATGG
ATTCCAAAACGAAACGGGAGAAAAAAGAGGAGGAGGAGCAGAAGGACGCG
CAGGACCAGAAGCCACTGGAGGACGGCTCCGTGCAACCGCCCAGCAATCC
GACAGCCATCAAAATCGAGGAGGAGGACAAGCCAGTGAAGCCGCCGCCGC
AGCCGCAGGCTCAGGAGGAAGTCGCGCCCAGTTCGCCGGAGACAGCAGCG
AATCCCAGCCAGAGAACTGCGGGCAAGATCACCCGTAGCAGTCTAAATGG
CACAGCCAACCAGGCGCCCACCCGCTCCCCAACGATAATAAAGCGTCTGC
GAAAGAGCACGCGCTTCAAGGCCAAGCAAACGGGCAAGGGCACTCCCGGA
AGCGGCAGTAGCCAGTCAAATGGCCACAATAGCGGGGCGAATGGTTCCAC
CGGCAGCTCCGTGCACCTCGCGGGCGCTGGCGCCCATCCCAGTAATACCA
ACAAGCATGGGAAGTCCGGTCCAGCGGGCACAGGCGGGGCCACTGGAGCC
CGTAATCGCCGCGCTCTCTTCAAGAAACCAGCACAGAAAACTCCCAAGGT
GCACGCGAGCACCAGGTTCGTGAGAAGCCTTTTCCACAAGGGCAGCTATA
TACAAATCGGGGATATCGTCAGCATTGTGGACAGCGAGCAGAATCTGTAC
TACGCCCAGATACGCGGTCTGCTTGTGGACGCCTATTGCGAGAAGTCCGC
CTTCTCACTGGCTGATTCCCACGCAGGAACAGTCCGGATCCCAGGAAGGC
TTCGATCCCCTACCTACCTAATCGGACCCGATGGAGGGCTGTCCCGGAAG
CTTTGCTTACCTAAAGTCCGTGATGCATGCCTCCCCAGCAACCTACTACT
CGAAACGGAGACACCCCGGTTACCCTGCCGA
UFO08358.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:17:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13367-RA | 1550 | CG13367-RA | 135..1254 | 9..1130 | 5170 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:17:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 644895..645914 | 9..1025 | 4825 | 99.3 | Plus |
| X | 23542271 | X | 644361..644585 | 9..233 | 1125 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:17:48 has no hits.
UFO08358.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:42 Download gff for
UFO08358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13367-RA | 128..1229 | 1..1103 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:12:51 Download gff for
UFO08358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13367-RA | 128..1229 | 1..1103 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:50 Download gff for
UFO08358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13367-RA | 128..1229 | 1..1103 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:50 Download gff for
UFO08358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 644888..645913 | 1..1024 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:12:51 Download gff for
UFO08358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 538921..539946 | 1..1024 | 98 | -> | Plus |
