UFO08362.5prime Sequence
1129 bp (1018 high quality bases) assembled on 2011-07-23
> UFO08362.5prime
CAGTCGACATGGTGTTCTACTTCAAGAGCAATGTGGTCCAGCCGCCGGCG
ATGCTATACATGGGTCGCGACAAGCACGAAAACGAGGAGCTCATCAGATG
GGGCTGGCCGGAGGACGTGTGGTTCCATGTCCACGACCTGTCCTCGGCCC
ACGTGTATTTGCGGCTACGGAAGGGCCAGACAATCGACGACATACCCACC
GATGTGCTGGTGGACGCCGCTCAGTTGTGCAAGGCGAACAGCATTCAGGG
CAACAAGGTGAACAACCTGGAGGTGGTGTACACCATGTGGGAGAATCTGA
AGAAGACCCCGGACATGGAGCCCGGCCAGGTGGCCTACCACAACGAGAAG
GCGGTGCGTCGCATTCGCCTGGAGAAGCGCATCAATGAGATTGTCAATCG
CCTGAACAGGACCAAAACGGAGGAGGAGCATCCCGATTTTCGGGGATTGC
GCGAGGCGCGGGATGCCGCTGAGCGGCAAGATCAGAAGAAGATCCAGCGC
GAGCGTCGCGAGCAGGAGAAGGAGGCTGCCAAGCAGCGTGAGCTGGAGGC
GGAGCTGCGCAGCTATGCGTCCCTCCAGAAATCGGAGAACATGCGCACCA
ACTACGATGCCGGCAACGAGTCGGATGACTTCATGGCAAGCTTTCTAGAC
CATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAA
TCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGC
TTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAAC
AAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCC
AAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTAC
TGTTGTAATTCATTAAGCATTCTGCCGACATGAAGCCATCACAAACGCAT
GATGAACCTGAATCGCCAGCGCATCAGCACTGTCGCCTTGCGTATAATAT
TTGCCCATGGTGAAACGGGGCGAGAAGTTGTTCATATTGCACCGTTTAAA
TCAAACTGTGAACTCAACCAGGGAATGCTTGAACGAAAACCATTTCTCAA
TAACCTTAGGAATTGCTAGGTTACCGGTA
UFO08362.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:18:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4593-RB | 889 | CG4593-RB | 91..717 | 9..635 | 3135 | 100 | Plus |
| CG4593-RA | 1123 | CG4593-RA | 91..717 | 9..635 | 3135 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:18:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7013977..7014603 | 9..635 | 3135 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:18:51 has no hits.
UFO08362.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:51 Download gff for
UFO08362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4593-RA | 67..701 | 1..635 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:13:18 Download gff for
UFO08362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4593-RA | 83..717 | 1..635 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:10 Download gff for
UFO08362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4593-RA | 83..717 | 1..635 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:10 Download gff for
UFO08362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7013969..7014603 | 1..635 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:13:18 Download gff for
UFO08362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6908002..6908636 | 1..635 | 99 | == | Plus |
