UFO08365.5prime Sequence
1127 bp (1015 high quality bases) assembled on 2011-07-23
> UFO08365.5prime
CAGTCGACATGGAACCCCTAGAACCGGACGTTATTACCACCCAAGCAAAG
GAACTGTCGGCGGTGGAGCGACAAAAGTTGGACGAGCAAAACAAGCGTGG
TCTCGTGCCCGAATACAAAGCGAACAAGTTGGAAATCGATGCCCAGAGGA
ACTGGGATATATTCTACAAGCGAAATGAGACTCGTTTCTTTAAGGACCGC
CACTGGACAACGCGTGAGTTCCAGGAGCTGCTGGACCAGGAGGAGTTCCA
CGAGAAACGAACACTTTTCGAAGTGGGATGCGGTGTGGGCAACCTGGTAT
TCCCGCTGCTGGAAGAACAAACCAGCGAAGAGGGATGTTTCAGCAATAGC
AGATTCTTCTTCTACGCGTGCGATTTCTCACCGCGAGCAGTGGAATTCGT
GCGCTCCAATCCTCTGTACGATCCCAGCCAGATATCTGCCTTTCAGTGTG
ATATCACAACGCAACAGGTGCATGACCACATCCCTCCCAGCAGCGTGGAC
ATTTGCACGCTGATCTTTGTGCTCTCCGCCATACATCCACAGAAGTTCAA
AGATGTGGTGCAGAACCTGGGAAAGCTACTAAAGCCAGGAGGACTGCTTC
TGTTTAGGGATTACGGTCTCTACGACATGGCACAGTTGCGCTTTAAGCCG
GGCAACAAGATAGCAGAGAACCTCTATGTAAGACAGGATGGCACCCGTAG
CTACTTCTTTTCAGAGGAGGAAGTATCCAAGCTGTTTCAGGAGAACGGCT
TTGAGGTCATTACCAATGCCTATGTCCATCGTCGAACTCTAAATCTTAAG
GAAGGCGTGGATGTGCCGCGCATTTTTCTGCAAGGCAAGTTTAGGAGGAA
AAACCTGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAA
GTGTCATAATCATAATCATAATCATAATCATAATCACACTAGCCTAGAGA
TCCTGTCATGACTAGTGCTTGATTCTCAACCAATAAAAAACGCCCGCGCA
CGGAGCGTTCTGAACAATCCAGAATGGAGTTTGAGGTCATTACTTGGATC
TATTCAACAGGTTCAGCGGAGCTCGAATCAATTACGCCCGCCTGCCACTC
ATCGCAGATACTGGTTATTCATAGCAT
UFO08365.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:19:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34195-RA | 1184 | CG34195-RA | 230..1080 | 7..857 | 4255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:19:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17733533..17734379 | 11..857 | 4235 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:19:05 has no hits.
UFO08365.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:53 Download gff for
UFO08365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34195-RA | 206..1063 | 1..857 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:13:26 Download gff for
UFO08365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34195-RA | 223..1080 | 1..857 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:17 Download gff for
UFO08365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34195-RA | 223..1080 | 1..857 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:17 Download gff for
UFO08365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17733528..17734379 | 4..857 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:13:26 Download gff for
UFO08365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13621033..13621884 | 4..857 | 99 | == | Plus |
