UFO08377.5prime Sequence
1122 bp (1027 high quality bases) assembled on 2011-07-23
> UFO08377.5prime
CAGTCGACATGTCCGCTCCCATTCGCTACTACTATGACCTGATGTCGCAG
CCCTCGAGGGCGTTGTTCATTATCTTCCGGCTGAGCAACATGCCCTTCGA
AGACTGCGTGGTTGCCCTGCGCAATGGCGAGCACTTGACCGAAGACTTCA
AGAAGGAGATTAACCGCTTCCAGCGTGTGCCCTGCATCCACGACAATGGC
TACAAGCTAGCGGAGAGCGTGGCCATCCTGCGCTATTTGAGCGCCAAGGG
CAAGATACCGGAGCACCTCTATCCCAAGTACTTCGTTGACCAGAGCCGCG
TCGACGAGTTCCTCGAATGGCAGCACATGTCCCTGCGGCTCACCTGCGCC
ATGTACTTCCGCACCGTGTGGCTGGAGCCGCTTCTGACAGGACGCACACC
CTCCGAAGCCAAAATCGAGACGTTCCGCATGCAGATGGAGCGCAACCTCG
ACGTAGTCGAGGAGGTCTGGCTGGAGGGCAAGGACTTCCTCACCGGATCC
TCCCTCACCGTTGCGGACATCTTTGCAGCCTGTGAAATCGAACAGACACG
AATGGCCGACTACGATGTCAGGATCAAGTACCCCAAGATCAGGGCGTGGC
TGAAGAGAGTGCGCCAGAGCTGCAATCCGTACTACGATGTGGCCCACGAG
TTCGTCTACAAAATCTCCGGAACGGGTCCACAGGCCAAGCTAGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGA
CTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGT
TCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACA
GGAGTCCAAGCGAGCTCGATATCAAATTACGCCCGCCCTGCACTCATCGC
AGTACTGTGTAATTCATTAAGCATTCTGCGACATGCAGCATCACAAACGG
CATGATGAACCTGATCGCCAGCGCATCAGCCCTTGTTCGCCTTGGCGTAT
ATATTTGCCATGCTGAAACGGGGGCGAAGAGTGGTCATATTGCCACGGTT
AATCCAAACTGGTAACTCACCA
UFO08377.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:19:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstT3-RB | 978 | CG1702-RB | 161..844 | 9..692 | 3420 | 100 | Plus |
| GstT3-RC | 1369 | CG1702-RC | 552..1235 | 9..692 | 3420 | 100 | Plus |
| GstT3-RA | 875 | CG1702-RA | 58..741 | 9..692 | 3420 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:19:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20469035..20469459 | 126..550 | 2125 | 100 | Plus |
| X | 23542271 | X | 20469520..20469662 | 550..692 | 715 | 100 | Plus |
| X | 23542271 | X | 20468576..20468694 | 9..127 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:19:43 has no hits.
UFO08377.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:58 Download gff for
UFO08377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1702-RB | 121..810 | 9..699 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:13:41 Download gff for
UFO08377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstT3-RA | 58..747 | 9..699 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:33 Download gff for
UFO08377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstT3-RA | 58..747 | 9..699 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:33 Download gff for
UFO08377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20468576..20468693 | 9..126 | 100 | -> | Plus |
| X | 20469036..20469458 | 127..549 | 100 | -> | Plus |
| X | 20469520..20469668 | 550..699 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:13:41 Download gff for
UFO08377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20339603..20339720 | 9..126 | 100 | -> | Plus |
| arm_X | 20340063..20340485 | 127..549 | 100 | -> | Plus |
| arm_X | 20340547..20340695 | 550..699 | 98 | == | Plus |
