UFO08380.5prime Sequence
1156 bp (1050 high quality bases) assembled on 2011-07-23
> UFO08380.5prime
CAGTCGACATGGCATACACTGATCCTGCGCAACGAAACCAGGTGACCGTG
CTCCAGGTCGGCTATTCTCGCCAAGAAGAAGGAGACGAGTCCGCCATGCG
GGCTAACTGCACATGCACACTGGTCCGCTGCCGGGATGGCACCAACATAA
TCGTGGACACACTGACGGCCTGGGATGGAGATCACCTGCGTTCGTTGTTG
GGCCAGCAGGGACTAGGCGTCGATGACATCCACGTGGTGGTCTGCTCTCA
CGGACACTCTGACCACATCGGTTGCAACTATCTGTTTCAGAAGGCACGAA
TGCATTTGGTCGGCGCATGTGCCTCACATCACGACCTCTACATGGACCAC
CTTGGTAGTGGTAATCCAGACGAGCAACTGGCCCTAGATTCGAATGCCGA
GGTGGTAGTGAGGCGGTCGCCAGGACACACCCTCAGCTGCGTTTCAGTTC
TTGTGGAAAATTCCCAGCTGGGTGGACGGGTCGGTATCACCGGAGATCTC
TTCGAGCGTCGCGAGGACATCGACGATGAGAACATTTGGATGGACGCTGG
AAGCGAAAACGAGAAGGTGCAGCGCGAGGAGCGCAGTAAAATGGCACAAC
TGTGCGAGTTTATAATCCCAGGACATGGTCCGATGTTTTCTGTCACACAA
TCAATGCGCTGTAAACTTAAAGAAGACGCCACTTCTAACACTGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGA
CTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGT
TCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACA
GGAGTCCAAGCGAGCTCGATATCAATTACGCCCCGCCCTGCCACTCATCG
CAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACA
AACGGCATGATGAACCTTGAATCGCAGCGGCATCAGCACCTTGTCGCCTG
CCGTATAATATTTGGCCCATGGGTGAAACCGGGGGCGAAGAAGTGGTCCT
ATTTGCCACGTTAATTCAAAACTGGGGAAATTCACAGATTGCTTGAACAA
AAACTA
UFO08380.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:19:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9117-RA | 906 | CG9117-RA | 88..771 | 9..692 | 3420 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:19:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6037132..6037815 | 692..9 | 3420 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:19:53 has no hits.
UFO08380.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:59 Download gff for
UFO08380.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9117-RA | 88..777 | 9..701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:13:45 Download gff for
UFO08380.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9117-RA | 88..777 | 9..701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:37 Download gff for
UFO08380.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9117-RA | 88..777 | 9..701 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:37 Download gff for
UFO08380.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6037126..6037815 | 9..701 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:13:45 Download gff for
UFO08380.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6037126..6037815 | 9..701 | 99 | | Minus |
