UFO08381.5prime Sequence
819 bp (795 high quality bases) assembled on 2011-07-23
> UFO08381.5prime
CAGTCGACATGTCATTTGTGGAAATATGTCTCGTCCTGGCTACCATCGGC
TTACTATTGTTCAAGTGGAGTACTGGCACCTTTAAGGCTTTCGAAGGGCG
AAACCTATACTTCGAGAAACCGTACCCATTTTTAGGTAACATGGCTGCAT
CGGCCTTGCAAAAAGCCTCATTCCAAAAACAAATCTCCGAGTTCTATAAT
CGCACTCGACATCACAAACTGGTAGGGCTCTTTAATCTACGCACCCCAAT
GATCCAGATAAACGACCCCCAGCTGATTAAAAAGATATGCGTTAAGGACT
TTGACCACTTTCCCAACCACCAGACACTGAATATCCCTAACGAGCGTCTA
GTTAACGACATGCTCAATGTGATGAGGGATCAGCACTGGAGGAACATGAG
GAGCGTCCTGACCCCGGTCTTCACGTCGGCCAAGATGCGAAACATGTTCA
CCCTGATGAACGAGAGCTTCGCTCAATGCCTGGAGCACCTGAAATCCTCC
CAGCCTATTGCTGCAGGTGAAAATGCCTTTGAGCTGGACATGAAAGTGCT
TTGCAACAAGCTTTCCAACGACGTGATTGCAACAACAGCTTTTGGACTAA
AGGTTAACTCATTTCGATGACCCAGAGAATGAGTTCCATACGATCGGGAA
AAACCCTAGCTTTCTCACGGGGTCTTCCCGTTCCTAAAGTTCATGATGTG
CTTACTTGCTCCCGAAAGTTTTTAATTTTTTCAAGCTGACTATCTTTGAC
TCCACCAATGCTGAGTACTTTGTACGCCTGGTGGTGGATGCTATGCATAC
CGGGAGAAACACAATATCT
UFO08381.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:19:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp9b1-RA | 1752 | CG4485-RA | 32..838 | 9..818 | 3915 | 99.3 | Plus |
| Cyp9b2-RA | 1667 | CG4486-RA | 150..857 | 108..818 | 1035 | 77.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:19:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7129003..7129510 | 726..215 | 2360 | 99.2 | Minus |
| 2R | 25286936 | 2R | 7129572..7129777 | 214..9 | 1030 | 100 | Minus |
| 2R | 25286936 | 2R | 7131424..7131819 | 610..215 | 675 | 78 | Minus |
| 2R | 25286936 | 2R | 7128848..7128940 | 818..727 | 400 | 97.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:19:57 has no hits.
UFO08381.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:00 Download gff for
UFO08381.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp9b1-RA | 31..837 | 9..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:13:47 Download gff for
UFO08381.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp9b1-RA | 32..838 | 9..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:39 Download gff for
UFO08381.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp9b1-RA | 32..838 | 9..819 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:39 Download gff for
UFO08381.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7129572..7129777 | 9..214 | 100 | | Minus |
| 2R | 7128847..7128940 | 727..819 | 96 | <- | Minus |
| 2R | 7129003..7129510 | 215..726 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:13:47 Download gff for
UFO08381.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3016352..3016445 | 727..819 | 96 | <- | Minus |
| arm_2R | 3016508..3017015 | 215..726 | 99 | <- | Minus |
| arm_2R | 3017077..3017282 | 9..214 | 100 | | Minus |
