UFO08392.5prime Sequence
1148 bp (1025 high quality bases) assembled on 2011-07-23
> UFO08392.5prime
CAGTCGACATGTTCAAGATTAGGCAGCGGAACTGCATGCTGATAGTGACG
GCCCTGGTGCTGGCACCATGCATAGTGATCCTGATGGTGATGGGACCCGA
GTTATCCACCGAACAGTCGCTGACTCAGCGCCTAGCCGAATGCCATATGC
GGCTGCAGTATTTGGAGTCCATGTACCGCGCTCGCCAGGAGGACGTGGCG
CTGCTTTCCCAGTACCTGGGCCAATTGCAGATCGTCAATGTGACGGGAGC
CAGTGCACCACCGCCGCCGCCACCTTTGCCCGTGGTTAATCTGCTCGACG
GGCTGAGTCCCGAGGCTAGGCAACTGCTGAGAAATGCGTCGCATATCAGT
AAGGGTGGCAGTGCAAATGGCTCGATGGCCAGGAGCCAGAATATACGGCT
ACCGAATGCTTATCATTTCCTGCCGCATCTTCTGGACGATGCCGGCTCCC
TGCGACCAGCATACTTGCAAAGCAAGGGCCGTTCGGATGTGAGCATTGTC
CTGGGTGTGCCCACCGTGCGGAGGGAGAAGCAATCGTACCTCCTTGGAAC
CCTCCACAATCTCATCGAGAACATGAACGACGAGGAGCAGAACGAAACAC
TGATCATAGTCTATATAGGAGAAACGGATATGGAGTCCGTGCAACTTATT
GCCCGTCAAATCGAGTCAAGTTTCGATCAGCATGTGGAGAGTGGACTGAT
TGATATAATAGCACCTGCACCTAGTTACTATCCGAATTTCGAACGACTTC
GCATCACACTGAATGATCCTTTGGAGCGCGTTAAATGGCGCAGTAAGCAG
AATTTGGACTTTGCCTACCTGATGGCCTACGCCCATTCAAAGGGAACCTT
TTACGTTCAACTGGAGGACGATATACTGACCAAGCGGCAGTTCATAACCA
CCATGAAGAAATTCGCCCTTATCAAGAGCGCTTTGACGAAACCCGATCAC
CAGAATGGTTTGTGCTAGACTTTTGCCAGCTTGGCCTTTATTGGCCAGAA
TGTTCAAGAGTGCGGGAACTACCTACTGATCACCTATTCCAAATGTTTCC
TATAATGAAAAGCAGGTGGACTGGGTTACTTACGTAATTTTATTCCGAGT
TCAAGTTGTTCGCCACCGCGACAGATCAGGCACTGCAATGCGAGAAAA
UFO08392.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:20:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9384-RB | 4612 | CG9384-RB | 849..1940 | 9..1105 | 5110 | 98.3 | Plus |
| CG9384-RA | 4440 | CG9384-RA | 677..1768 | 9..1105 | 5110 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:20:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14763940..14765019 | 9..1090 | 4895 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:20:36 has no hits.
UFO08392.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:05 Download gff for
UFO08392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9384-RA | 649..1791 | 1..1144 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:07 Download gff for
UFO08392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9384-RA | 666..1808 | 1..1144 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:53 Download gff for
UFO08392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9384-RA | 666..1808 | 1..1144 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:53 Download gff for
UFO08392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14763929..14765071 | 1..1144 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:14:07 Download gff for
UFO08392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14757029..14758171 | 1..1144 | 96 | | Plus |
