UFO08396.5prime Sequence
767 bp (581 high quality bases) assembled on 2011-07-23
> UFO08396.5prime
CAGTCGACATGCCAATGCTGCCTACAATTGAGGAGGAGGCCAAGTTGTCC
TGGATCCGGCTAATGTGGAAATACCGCCTTCAGTTCCAGTCCATGGCCTC
GGCGTCGATTGTTTTCGTGGGCTGTGGAATGCGTTTGGCCTGGTCAATTT
TCGATACTCCTGCTGGCAAATTCTTAAACAACCATAATACCCACAATCTG
ATGATGAGCTGGTTTATTGGAGCTGCCGTAGGCGCCCTATTGGCAGCCCT
ATTTGTTCAGCGTGTCACCAAAAATGTGGCATATACCTCCAGTGGCTTCC
TGATGATTATAGCTGGCATTCTGAATGTAGTTCTTCCCCAGCATTTTCTG
GCCGCCTGCTACAGTAGCGTCAGTGTTGGTGCAGCCTATGGGCTAACCCA
GATTCAGGCACTGGTCACTGGATCCGAGGTGGCACACAAATCGATTCGAG
GAATGCTCCTCAGCTGTGAGAAGATATTCCTGTGGCTGGGGGTATGCATG
CAGGTGTTCTACACTCGCGTGTGGCACAATTTGAGGCCACTGGATACGCA
AGGATACGAGATGCACATTGATCAGTTGCATGGCATGGTGTTGGCCGGCC
TGGGGCCTGGGAGCTGTTATCCTGGCACTAGCTCATCGCCTGGAGTCACC
ATTACTTCTGCTGCATCAGGAACGAGATATGGCTGGGGGTGAGACCCTGT
AATCTCTATCGGACAATCCACCACCGAGTTTGTAACATTACGGGAGATGC
ATGCACTGCATAGCCTC
UFO08396.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:20:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14160-RA | 2112 | CG14160-RA | 266..1024 | 9..764 | 3540 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:20:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10087857..10088317 | 745..285 | 2105 | 98.1 | Minus |
| 3L | 28110227 | 3L | 10088798..10088980 | 284..102 | 915 | 100 | Minus |
| 3L | 28110227 | 3L | 10089042..10089135 | 102..9 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:20:11 has no hits.
UFO08396.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:02 Download gff for
UFO08396.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14160-RA | 259..1024 | 1..764 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:13:54 Download gff for
UFO08396.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14160-RA | 259..1024 | 1..764 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:45 Download gff for
UFO08396.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14160-RA | 259..1024 | 1..764 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:45 Download gff for
UFO08396.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10088798..10088979 | 103..284 | 100 | <- | Minus |
| 3L | 10087835..10088317 | 285..764 | 97 | <- | Minus |
| 3L | 10089042..10089141 | 1..102 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:13:54 Download gff for
UFO08396.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10080935..10081417 | 285..764 | 97 | <- | Minus |
| arm_3L | 10081898..10082079 | 103..284 | 100 | <- | Minus |
| arm_3L | 10082142..10082241 | 1..102 | 96 | | Minus |
