UFO08416.5prime Sequence
1162 bp (1055 high quality bases) assembled on 2011-07-29
> UFO08416.5prime
CAGTCGACATGTCTGGTGGTCCATCCATAACGATAAAAAGCCAACCAATC
GATGGTAACAACACGGGCAACGCTGCGGCGCAACAGCAGCAGCAGGCAGC
GAATGGCGCAGCAACCGCTGGTGCATCTGGAGCCGCTGGCAGCGCCCAGA
ATCCAGGACACGGAGGAGCTGCGTCCGGCGCTGGCAGTGTGCCGGCAGAG
GGAACGCGCCAGAACAGCCTACAGCGCATTCAGCAGCGAAAGCAAAAGGT
CTTCAATCTGCCCGTGCCACAGAAACTGGCCAAATTGTCGATGTATTCCG
CCTGCCAGTCTGAGGGATGCCGTTGCACCGGCTGGAAGACACCGCAGGAA
AATCGCCACCGTGACGTCGAGTCCTCCTACTGTCCGGAGTTCAACGAGGA
GTGCCGCAACACCAGCTGTCGCCATTCGCTGAGATCGCACATAGCCCATC
TGGACAATATATCCAGTTCCAGCATGAACGAGCTACTGGGCGCCATTATA
GACATGGAGAACCTATTCATGTCCATGCAGCGCGTCGAGGACGAGGACAC
CAAGAAGGTGTACCAGTACCTCTTCCGTTTGCTGCGCCAGTGCGTCCTCA
CGCGCCAGCAGGCGGTCATCCGGGGTCCTCTCGGCGATCCACCATTCGAG
ACGCCGTGCATCACCAAGGCTGTGCTCTCGTTGGTCTTCTACAAGTACAA
TCACCTGAGCACGCCTGAACTCCAAACCATGACCGAGGTGGCCAAGACGT
TCTTGAACTTTCTGAACCACTACAACTTTGAATCGCCGTCGACCAGGAGA
GGAGATCTCACCCACGAGGATGCCTCTAACTACAAAATCAACTACACCAG
GTGGGTTGGTGTTCTGCCACGTGCCCGCCTTCTGTAACTCCCTGCGCCAA
TGTGAAACGTCCCTAGTGTTTGGACGAACGCTCCTGCGCACCGTTTTCCA
GTGCATGTCGCAGCAGCTGAAAAAAGAAGTGCATCTCGAGCGGGATCGCT
TTCCCGGAGGACAAGCGTTCGATCATCACGCTGATGCCGAAGTTTTTGGA
AACGCTTCGCGCCGATGCCTCAAGGATGATCGCCCATCTGGATACAGCTA
CGCGTCAATTCTTGCATCACAAGAAGCGTTAACAGGAAGGTGGCAATGTT
ACCAATTGGTTC
UFO08416.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:24:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gcn5-RA | 2770 | CG4107-RA | 112..1206 | 9..1101 | 5260 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:24:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12522821..12523903 | 1091..9 | 5100 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:24:27 has no hits.
UFO08416.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:11:35 Download gff for
UFO08416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pcaf-RA | 106..1208 | 1..1104 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:30:48 Download gff for
UFO08416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gcn5-RA | 106..1208 | 1..1104 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:59:17 Download gff for
UFO08416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gcn5-RA | 106..1208 | 1..1104 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:59:17 Download gff for
UFO08416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12522807..12523909 | 1..1104 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:30:48 Download gff for
UFO08416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12515907..12517009 | 1..1104 | 98 | | Minus |
