UFO08418.5prime Sequence
1115 bp (1029 high quality bases) assembled on 2011-07-29
> UFO08418.5prime
CAGTCGACATGGATTTACAGCAGCTGGAGGAGCAGGCTCGCCAGGCAGCG
CTCAAGGACATACAGAACATGTTGCAGCGACCAGGTCAACTGGAGAAGGT
GGAACAATATCGCCACCGAATCGCCCGGAAGAAGGCATCCGTTGAGGCGC
TCCTTAAGACCGGAATGCAAGGACAGCTGGACGGGGTCAGGGTGGGACTT
AAGCAGTTGGAGACCTGCATGCAGGACGTGCGCGAGGTAAGGCGTCGAAT
GGACGAGGTGGAGCGCCTGCTGAGGGGCGTTCCCGAAGTCTACGACGCTT
TGGAAGTTGTGCGGGAGGAAAACACAAAGCACTCCCAGTACGCCACCGCC
ATGGAGAATCTGAAGCACATCTTCAACGTAGATGCCAGCGTACAAAAGAC
GATGGCGCTGATCGAGGATGATAAGCTGCTTAATGCCCATCAGTGCCTGG
CGGATCTGGAGAATTCGCGGGATGATCTTCTCTACGAACTGCACAAGCAG
CCCAAGCAGCATGCGTCCGACAAGATCACCCTAAAGCGTCACTTCGAGAA
GGTTGACACGGTATCCCAAGAGCTGGAGAAAAAGCTGCGACTCATTCTTA
GCCGCACGCTGAACACTCTGCGCAAGAAGCCCACCATCATCGTTACCGCC
CTACGCATCATAGAGCGGGAAGAGAAAAACGACCAGTTCGCGTTGCAGCA
GCAAAAGGTCACAGGATTCCTGCCGCCTGGAAGACCAAAGGCTTGGCGCC
GCATGATCATGGACGTGCTACAACAGTCGGTGATAACGCGCATAGAGGGA
TCCAAGCTAGAGGAGCGGGCCGATAACAAGATGTGGTTAGTACGAGACCT
GGAGATATTGCGTCAAATCATTCTCGAGGATCTGCGCGTTGTGAAGTCCC
TTTGTGTGCCCTGCTTCCCGCCGCACTACGACATTTTCGCGAATATGTCA
AGTTCTATCACGAATGACTTTCTAGCTATCTGACACATGTGCGCTCGGGC
TGAGGCATGAATATGTATCATGATGCTTGGGTACCCACACCTATCCTGCG
TCAGCTGATGTCCCATCCGATCTTATGTGGATGTACACGACAGAAAGTAC
TCTGCCTGCCTCCGA
UFO08418.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:24:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sec6-RA | 2405 | CG5341-RA | 95..1216 | 9..1114 | 5115 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:24:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18625343..18626318 | 9..983 | 4800 | 99.7 | Plus |
Blast to na_te.dros performed 2014-11-26 17:24:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| G6 | 2042 | G6 G6_DM 2042bp | 512..578 | 616..685 | 127 | 69 | Plus |
UFO08418.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:11:36 Download gff for
UFO08418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sec6-RA | 77..1198 | 9..1114 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:30:50 Download gff for
UFO08418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sec6-RA | 95..1216 | 9..1114 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:59:20 Download gff for
UFO08418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sec6-RA | 95..1216 | 9..1114 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:59:20 Download gff for
UFO08418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18625343..18626318 | 9..983 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:30:50 Download gff for
UFO08418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14512848..14513823 | 9..983 | 99 | -> | Plus |
