UFO08443.5prime Sequence
1112 bp (1031 high quality bases) assembled on 2011-07-29
> UFO08443.5prime
CAGTCGACATGATGTTAGACATTAAGAAGACCAGAGGATTCCACAAGATT
CCACAGGCATCCAAATTACAGTCAACAACGAAAACATCATCAGTAGTAGC
CACATCAGCATCAAGTCAAAACGAAGTGCCATCACCAGGAGGATCGGCTG
GATCAAAAGTTGGAGCTACCAATCCAGTGCGAGCGGCCAACCAGCGCTTC
TTCCTAGTGTCCAGCTACAAGGACCCCACATTTCTGAAGGCCGAATGCGA
CCTGGCCCATGCCCATGTGACAACCAGCAAAGTGAAAACCACGTTGCAAC
CGCACCGGCGGAGTCGTGCTGGTGAGGATTCAAGGAACAACAACTACAAC
ACTAGCCGGGCACCAACGCTGATTAATATGCGACGCCCGTCTCTGTTCAA
TGGCAATCAGCAACCAACCACCACCAACAGCACCACCATCAACAACACCA
CCAGCAGGAACACCACCAGTAACACCAGCAACGGGGTGCTCAAGTACAGC
GTGCGCTCCACGACGGCAACTGCAACTTCAACGTCTACCAGGAACTACGG
CAAGCTGAAACCGCTCAATAACAACCAAACGACCGCTGGAGTAGCTATGA
TGAATGGACACACCAATAATAATAACAACAACACCAGAAACAGCAGCAAC
ATCAACAACGGTGGCAATAACAACATGCAACGCCAACAACAGCAGCACGA
TGACATAAGCTTCATAGACAGCGATGATCCGCCGGCAACTGGTGGCCCTG
AAGCCGGAATATCGACAACCAAGACGAGCATTTGTTACTTCAAGCCCATC
ACCCCGCCGCTGCAGCTGCGGCACGAGCAAAATCAAGTTCAGCAACAGGA
AGAACAGCCGCAGCCCAGCAGCTCCAAGTCTGCCAGCCATCGCTATCCAC
GACCCAAGTCCACTATTATAGCATCGGCCCACTCGATTTTGCGGCAGCTT
TGAGAGTTTAGTGGTGGCCTCTATAGGCAGACATGCGAGACGACATGAGA
GCAGACCAGTAGCATGCAGAAGAACGCATGATCATGAGTATATCTCGATA
GAGAAGTCACACTCATGGCAGAAAGAACAAATCGCCTGATAGTAGACTGC
CATGCTCACCGT
UFO08443.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:25:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14619-RI | 4341 | CG14619-RI | 1193..2223 | 3..1023 | 4870 | 98.8 | Plus |
| CG14619-RG | 5178 | CG14619-RG | 2066..3096 | 3..1023 | 4870 | 98.8 | Plus |
| CG14619-RF | 4305 | CG14619-RF | 1193..2223 | 3..1023 | 4870 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:25:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 22463903..22464879 | 9..982 | 4735 | 99.7 | Plus |
Blast to na_te.dros performed 2014-11-26 17:25:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2805..3006 | 398..592 | 180 | 59.8 | Plus |
UFO08443.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:11:52 Download gff for
UFO08443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14619-RC | 30..1013 | 1..982 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:31:39 Download gff for
UFO08443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14619-RF | 1191..2174 | 1..982 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 18:00:05 Download gff for
UFO08443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14619-RF | 1191..2174 | 1..982 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 18:00:05 Download gff for
UFO08443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 22463896..22464879 | 1..982 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:31:39 Download gff for
UFO08443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21865732..21866715 | 1..982 | 99 | == | Plus |
