UFO08467.5prime Sequence
1128 bp (1028 high quality bases) assembled on 2011-07-29
> UFO08467.5prime
CAGTCGACATGATTGGTGTGCTAATGCGTTTTCTCTGGTCCTTGGCCATG
GTGCAGTGCATCCAGGCTAGAGTGTCGATGCTGCCTCGTTTTTATGGACA
AGACAGCGCTGTTATAGTGGACATCAATAGAAAATTCCCACCTAGAATGG
ACTCCAAGCTGCAGAATGCCCTGTACTACAACCTGCCGGTCTACAAACTG
ATAAAGCCAACCACAACAACTACGACAACCACGACGGCTGCTCCAACCTC
TGGCTATCCTGCTGATCTCCTGAACATTGCTCACAACAAGCTGGGCCTCA
AAGATCTGCCCAATCTCGAGGAGCTGGGCGAGATGATTGGTACGGATGGT
GCCAGCGAGACCATAGACTATATACGCACGCTAACTGGAACGGAGGAGGG
TTTGGCCCTGATGAAACAGTATCTGGATGCCCTGCACTTCGAGGAGGCGG
AGGAGGAGAATGTGGCCGAGGAACAAGAGAAGGCTGAAGACGACGACGAC
GATGATGATGACAACACCATGGGCAATGCCAGCTACGATGAGATGCCGCA
GGAAAAATCCACCACCACTGCAGATCCCCGTCCTGAGCTGAGTTTAATGC
AGCGTTTCGGTGACTTTGTGAAGCAGTACAACCTGTGGTCTGGTCAGGTC
ACCACTACCACCACTCCTGCTCCGTTCATCGCTCGGCCAAGTGGCTCTTT
CCAGCCCGTCTTTGTGGCTCCTCCTCCTGCTGGCTTGAAACCTTTTCGTC
CCATCCTGGTTAGGCAGCCACTGCCGTATCACTATCCCATTCCCCTGCGT
CCCGTATCGCTGGCCACCACAAAGCCAATCCAGGTGACCACCACCACCAC
GACCACAACCACACCTGCCCCCGTGACCAAGCCACATCTCAACACGCCCA
AGCTGATCATGCAAGAGGATGCGGAGGGCAAATACTCAACATTGCCTCGT
ACATCCAGCAGTTGGCCAAATGGCCAATATTTCGCGCAAGTCGTGAAATT
CTTTCTGGACGGCAGCCCAAGTGCGGACTGTCAGCGCCTGACCCCCTGCA
CTCAGTCCCGAACAGACCAGCATGGACCCCAGGTGCTCAAGCCTGCAGCA
CGCACTGGAAACACAACATGATCTCACG
UFO08467.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:26:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| link-RA | 1394 | CG13333-RA | 40..1155 | 9..1107 | 5125 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:26:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13555988..13557005 | 9..1022 | 4860 | 99.4 | Plus |
Blast to na_te.dros performed 2014-11-26 17:26:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 861..905 | 468..512 | 116 | 78.3 | Plus |
UFO08467.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:00 Download gff for
UFO08467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13333-RA | 92..1228 | 5..1124 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:32:02 Download gff for
UFO08467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| link-RA | 36..1172 | 5..1124 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 18:00:27 Download gff for
UFO08467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| link-RA | 36..1172 | 5..1124 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 18:00:27 Download gff for
UFO08467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13555984..13557120 | 5..1124 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:32:02 Download gff for
UFO08467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9443489..9444625 | 5..1124 | 97 | | Plus |
