UFO08474.5prime Sequence
1166 bp (1031 high quality bases) assembled on 2011-07-29
> UFO08474.5prime
CAGTCGACATGATTTATGCGATCGTGATACACATACTGTCCCTTCTGGTG
GGCTGTTTCTATCCAGCATTCGCGTCCTACAAGATCCTGAAAAGTCAGAA
TTGTAGCGTCAATGATCTTCGCGGATGGTTAATCTACTGGATTGCCTATG
GAGTTTATGTGGCCTTTGATTATTTCACAGCGGGTCTGCTGGCATTTATT
CCATTGCTAAGTGAGTTCAAGGTGCTTCTCCTGTTCTGGATGTTGCCCTC
TGTGGGCGGCGGCAGTGAGGTGATCTACGAGGAGTTCCTGCGATCCTTTA
GCTGTAACGAATCCTTCGACCAGGTCCTGGGACGTATCACCTTGGAATGG
GGCGAATTGGTGTGGCAACAAGTTTGCTCCGTTCTTAGCCATTTGATGGT
TTTGGCAGATCGCTATCTCCTGCCCAGCGGTCATCGTCCTGCCCTCCAAA
TAACGCCCAGCATCGAGGATCTGGTCAACGATGCCATAGCCAAAAGGCAG
TTGGAAGAGAAGCGGAAACAGATGGGTAACTTATCTGATACCATCAACGA
GGTTTTGGGAGAAAATATCGATTTAAATATGGATCTGCTGCACGGATCCG
AATCTGATTTATTGGTTATTAAGGAGCCTATTTCCAAGCCCAAGGAGAGA
CCAATACCGCCGCCGAAGCCAATGCGTCAGCCATCATCAAGCAACCAGCA
AGAAATGAATCTTTCGTCGCAGTTTATGGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATT
CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA
GATGGAGTTCTGAGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGC
TCGATATCAAATTACCGCCCCGCCCTGCCACTCATCGCAGTACTGTTTGT
AATTCATTAAGCATTCTGCCGACAATGGAAGCATCACAACGCATGATGAA
CCTGATCCGCCAGCGCATCACCACCTTGTCGCCTTGGCGTATAATATTGC
CATGTGAAACGGGGCTAGAAGTGTCAATTGGCCGTTAAATCAAACTTGGT
GAACTTCACCCAGGGG
UFO08474.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:26:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11697-RA | 934 | CG11697-RA | 96..815 | 9..728 | 3600 | 100 | Plus |
| CG11697-RB | 880 | CG11697-RB | 355..761 | 322..728 | 2035 | 100 | Plus |
| CG11697-RB | 880 | CG11697-RB | 96..358 | 9..271 | 1315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:26:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11572802..11573521 | 9..728 | 3600 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:26:40 has no hits.
UFO08474.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:03 Download gff for
UFO08474.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11697-RA | 96..815 | 9..728 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:32:12 Download gff for
UFO08474.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11697-RA | 96..815 | 9..728 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 18:00:33 Download gff for
UFO08474.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11697-RA | 96..815 | 9..728 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 18:00:33 Download gff for
UFO08474.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11572802..11573521 | 9..728 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:32:12 Download gff for
UFO08474.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11466835..11467554 | 9..728 | 100 | == | Plus |
