UFO08476.5prime Sequence
1128 bp (1005 high quality bases) assembled on 2011-07-29
> UFO08476.5prime
CAGTCGACATGTCTGCAGCCAACATGCCGACGACAACAGGAGCTCAGGGA
TCGGGAAACCAAGTTCCCACAACTAGCACTACGATTGTAAACCACTTCCG
GGAGTTGATCAAGGAACCGAAGAACCTCGACGAGGCGGCCAACTATCTGT
ACCAGTCGCTGCTCGACGACGCCGTAGTCGGAATCTTTAACGAGACACAT
CATCTGCGAAAGTCAGGGAATCTGGCCGCCCTGGACGGAGTGCCGGAGGA
CTCAACCTATCGAATGTGCGAGATGCCCAACCTGGACATATTCGGCATCT
CAACGGCCAAAAAGCCAATGGACTGCACCTGCCCCAACTGTGATCGCCTG
GTGGCCGCCGCCCGCTTCGCCCCGCACCTGGAAAAGTGCATGGGCATGGG
TCGTATCTCGTCGCGAATTGCCTCTCGTCGCTTGGCCACCAAAGAGGGCG
CCACATCCGCCCACCTGCACTCTTCGGGAAATACCGGAGGCACTGATGAT
GAGGATGACGTGGACTGGTCGTCCGACAAGCGTCGAAAGAAATCAAACCA
GAACTCAAGGAACAACGGCTCCAAGAAGAACAATGGCAAAACCTTTGCAA
GCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAAT
CATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTC
ATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGA
GCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATC
AACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACT
CATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAAGCC
ATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGT
CGCTTGCGTAAAATATTTGCCCATGGTGAAAACGGGGGCGAAGAGTTGTC
CATATTGCCACGTTAATCAGACTGGTGAACTCCACCAGGATTGCTGAAAC
GAAAAACATATTTCTCATAACCTTAGGAAATAGCAGTTCACCGTAACACG
CAATCTGCAATATGTGTAACTGCGATCG
UFO08476.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:26:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sgf11-RB | 800 | CG13379-RB | 149..736 | 9..596 | 2940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:26:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18681101..18681688 | 596..9 | 2940 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:26:43 has no hits.
UFO08476.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:04 Download gff for
UFO08476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sgf11-RB | 103..690 | 9..596 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:32:14 Download gff for
UFO08476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sgf11-RB | 149..736 | 9..596 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 18:00:35 Download gff for
UFO08476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sgf11-RB | 149..736 | 9..596 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 18:00:35 Download gff for
UFO08476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18681101..18681688 | 9..596 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:32:14 Download gff for
UFO08476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18674201..18674788 | 9..596 | 100 | | Minus |
