UFO08477.5prime Sequence
1107 bp (990 high quality bases) assembled on 2011-07-29
> UFO08477.5prime
CAGTCGACATGAGGGTCTACTTGTATCAAATGCGCCCGGTGCTCTTTCTC
TTCTACATGGTGGAGACGACGGCCAACTTATTCGTTTTGTACTACCAACT
GAAAGCATTTGTTTTCGTCAATCTGACAACGATGAAATGGGAAGATGTTC
TAATCCAAAGCTTTTATATGTCCTTCTTTTACATATTCACAGTGGTAACG
CTCTTTGCCAGCATAAATCTCTGCACCGGTCATCGCACATCGATCGTTGA
GGAAGTTGTGCGTCCTCTGATCGGATTTGTTCTATATACGGTAATATCGT
TGATGGCACTGGGCGATGCCGAGACGGATTTCTATATATGGTATGATGGA
AGGAACCCGGATGATTTACTATATCCGGAGAAGCCGCTCCATCCGTTCTT
CGGTAGCCTGCGGGACCAGGCGACAGCCTCATTGGTGTCCAGTGTTATCT
ATCTGCTGCACTGCCTCATTGCGTTGGATGTCCTTCTGTCGAATGACGAT
TCGGATAACGAACGCGAGTCATCCAATTCCTCCGACGATGTGAACGAAGA
GGTCGACTACGTTCCAGTGCGTCTGTACGTCTTTGGCGGCGTGATGCAAC
GCTGGCTGGAGCAGTTCGACTGGTTTCAGGACTTTACCCACAGTGGAGTC
ACAGATATCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGT
AAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTA
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCC
GGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGTCATTA
CTGGATCTATCAACAGAGTCCAAGCGAGCTCGATATCAAATTACGCCCGC
CCTGCACTCATCGCAGTACTGTTGTATTCATTAGCATTCTGCGACATGAG
CATCACAACGCATGATGACTGATCGCAGCGCATCAGCACTTGTCGCTGCG
TATATATTTGCCATGTGAAACGGGGCGAGAGTGTCATATGCCACGTTTAT
TCAACTGGTGACTCACCAGATGCTGAACGAAACTATTCCATACCTTAGAA
TGCCAGT
UFO08477.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:26:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14315-RA | 771 | CG14315-RA | 70..720 | 9..659 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:26:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18158770..18159420 | 9..659 | 3255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:26:46 has no hits.
UFO08477.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:05 Download gff for
UFO08477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14315-RA | 62..720 | 1..659 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:32:16 Download gff for
UFO08477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14315-RA | 62..720 | 1..659 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 18:00:37 Download gff for
UFO08477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14315-RA | 62..720 | 1..659 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 18:00:37 Download gff for
UFO08477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18158762..18159420 | 1..659 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:32:16 Download gff for
UFO08477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13984484..13985142 | 1..659 | 99 | == | Plus |
