UFO08478.5prime Sequence
1146 bp (1001 high quality bases) assembled on 2011-07-29
> UFO08478.5prime
CAGTCGACATGTACAATCGCCACATCGCCCACTTATCGGCCGTGCAGGCC
AACGATACGCGCCATAATGCCACGCTGCGTTTCCAGAGTCGTCCCACGGA
TAACGTCTACTCGGATCCACGCCTCGAGCAACTGATTGTCTATCGGGCTT
TGTTGCAGCACCTGCTGCAACAGAAGGATCACTATGATCACGAACGGGAG
CTGGAACTCCAGCGTCTCGAGCGCTTTCGCAGCGAGGGAGCCAACGAGCG
CCGTTTGCAGATCCAGGAGCAAGTGCTCAAAAAGGCACAGGGCATGCTGC
CTGGCATCGTTTTCAAAATGCGCAACGAGGTGGACAAGCTGAAGCGCTTC
CTCGACATCGACAAGCAGCAGGAGCTGCGCCAACTGGACACCGCCCTCTA
CGACAACTGCGTCGAGCTACTCAATAACTGTCAATCTTCTCTGGAAAACA
TTAATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGT
GGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAG
ATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGC
GGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACT
GGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGC
CCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACA
TGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAG
CACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGA
AGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACC
CAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGAAA
TAGCCAGGTTTTCACGTACCCCGCCACATCTGCGAATATATGTGTAGAAC
TGCCGAAATCGTCGTGTATTCACTCAGAGCGATGAAAACGTTTCAGTTTG
CTCATGAAACGGTGTACAGGGTGAACCCCTAATCATATCACAGCTCACGT
CTTTTCATTGCATCGAATTCCGATGAACATTCATCAGCGGCAAAAT
UFO08478.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:26:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9072-RA | 585 | CG9072-RA | 83..530 | 8..455 | 2240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:26:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15095513..15095960 | 455..8 | 2240 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:26:48 has no hits.
UFO08478.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:05 Download gff for
UFO08478.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9072-RA | 68..527 | 1..462 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:32:19 Download gff for
UFO08478.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9072-RA | 77..536 | 1..462 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 18:00:38 Download gff for
UFO08478.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9072-RA | 77..536 | 1..462 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 18:00:38 Download gff for
UFO08478.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15095513..15095965 | 1..455 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:32:19 Download gff for
UFO08478.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14989546..14989998 | 1..455 | 99 | | Minus |
